Evidence map›Paper›PMID 35587364›Full record

ArticleeLife2022

SARS-CoV-2 host-shutoff impacts innate NK cell functions, but antibody-dependent NK activity is strongly activated through non-spike antibodies.

Ceri Alan Fielding, Pragati Sabberwal, James C Williamson, Edward J D Greenwood, Thomas W M Crozier, Wioleta Zelek, Jeffrey Seow, Carl Graham, Isabella Huettner, Jonathan D Edgeworth and 11 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 77 citations in OpenAlex.

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  10. An Autoimmunity-associated allele ofbioRxiv : the preprint server for biology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 4 institutions in 3 countries.

Ceri Alan FieldingDivision of Infection and Immunity, School of Medicine, Cardiff University, Cardiff, United Kingdom.ORCID 0000-0002-5817-3153
Pragati SabberwalDivision of Infection and Immunity, School of Medicine, Cardiff University, Cardiff, United Kingdom.
James C WilliamsonCambridge Institute for Therapeutic Immunology & Infectious Disease, Jeffrey Cheah Biomedical Centre, Cambridge Biomedical Campus, University of Cambridge, Cambridge, United Kingdom.
Edward J D GreenwoodCambridge Institute for Therapeutic Immunology & Infectious Disease, Jeffrey Cheah Biomedical Centre, Cambridge Biomedical Campus, University of Cambridge, Cambridge, United Kingdom.ORCID 0000-0002-5224-0263
Thomas W M CrozierCambridge Institute for Therapeutic Immunology & Infectious Disease, Jeffrey Cheah Biomedical Centre, Cambridge Biomedical Campus, University of Cambridge, Cambridge, United Kingdom.
Wioleta ZelekDivision of Infection and Immunity, School of Medicine, Cardiff University, Cardiff, United Kingdom.
Jeffrey SeowDepartment of Infectious Diseases, School of Immunology & Microbial Sciences, King's College London, London, United Kingdom.
Carl GrahamDepartment of Infectious Diseases, School of Immunology & Microbial Sciences, King's College London, London, United Kingdom.
Isabella HuettnerDepartment of Infectious Diseases, School of Immunology & Microbial Sciences, King's College London, London, United Kingdom.
Jonathan D EdgeworthDepartment of Infectious Diseases, School of Immunology & Microbial Sciences, King's College London, London, United Kingdom.
David A PriceDivision of Infection and Immunity, School of Medicine, Cardiff University, Cardiff, United Kingdom.ORCID 0000-0001-9416-2737
Paul B MorganDivision of Infection and Immunity, School of Medicine, Cardiff University, Cardiff, United Kingdom.
Kristin LadellDivision of Infection and Immunity, School of Medicine, Cardiff University, Cardiff, United Kingdom.
Matthias EberlDivision of Infection and Immunity, School of Medicine, Cardiff University, Cardiff, United Kingdom.ORCID 0000-0002-9390-5348
Ian R HumphreysDivision of Infection and Immunity, School of Medicine, Cardiff University, Cardiff, United Kingdom.
Blair MerrickDepartment of Infectious Diseases, School of Immunology & Microbial Sciences, King's College London, London, United Kingdom.
Katie DooresDepartment of Infectious Diseases, School of Immunology & Microbial Sciences, King's College London, London, United Kingdom.
Sam J WilsonMRC - University of Glasgow Centre for Virus Research, Glasgow, United Kingdom.ORCID 0000-0002-6065-0895
Paul J LehnerCambridge Institute for Therapeutic Immunology & Infectious Disease, Jeffrey Cheah Biomedical Centre, Cambridge Biomedical Campus, University of Cambridge, Cambridge, United Kingdom.ORCID 0000-0001-9383-1054
Eddie C Y WangDivision of Infection and Immunity, School of Medicine, Cardiff University, Cardiff, United Kingdom.ORCID 0000-0002-2243-4964
Richard J StantonDivision of Infection and Immunity, School of Medicine, Cardiff University, Cardiff, United Kingdom.ORCID 0000-0002-6799-1182
Institute of Infection and Immunity · CAKing's College London · GBUniversity of Cambridge · GBMRC University of Glasgow Centre for Virus Research · GB

Funding

Medical Research Council MR/P001602/1Medical Research Council MR/S00971X/1Medical Research Council MR/V000489/1Medical Research Council MR/V011561/1Medical Research Council MR/V028448/1Wellcome Trust 204870/Z/16/ZWellcome Trust 207503/Z/17/ZWellcome Trust 210688/Z/18/Z
6 · The paper itself

Abstract

The outcome of infection is dependent on the ability of viruses to manipulate the infected cell to evade immunity, and the ability of the immune response to overcome this evasion. Understanding this process is key to understanding pathogenesis, genetic risk factors, and both natural and vaccine-induced immunity. SARS-CoV-2 antagonises the innate interferon response, but whether it manipulates innate cellular immunity is unclear. An unbiased proteomic analysis determined how cell surface protein expression is altered on SARS-CoV-2-infected lung epithelial cells, showing downregulation of activating NK ligands B7-H6, MICA, ULBP2, and Nectin1, with minimal effects on MHC-I. This occurred at the level of protein synthesis, could be mediated by Nsp1 and Nsp14, and correlated with a reduction in NK cell activation. This identifies a novel mechanism by which SARS-CoV-2 host-shutoff antagonises innate immunity. Later in the disease process, strong antibody-dependent NK cell activation (ADNKA) developed. These responses were sustained for at least 6 months in most patients, and led to high levels of pro-inflammatory cytokine production. Depletion of spike-specific antibodies confirmed their dominant role in neutralisation, but these antibodies played only a minor role in ADNKA compared to antibodies to other proteins, including ORF3a, Membrane, and Nucleocapsid. In contrast, ADNKA induced following vaccination was focussed solely on spike, was weaker than ADNKA following natural infection, and was not boosted by the second dose. These insights have important implications for understanding disease progression, vaccine efficacy, and vaccine design.

Indexed as

COVID-19SARS-CoV-2AntibodiesAntibodies, ViralHumansKiller Cells, NaturalProteomicsAntibodiesAntibodies, ViralADCCADNKAimmunologyinfectious diseaseinflammationinnate immunitymicrobiologyNK cellsSARS-CoV2viruses

Identifiers

PMID35587364
PMCPMC9239683
OpenAlexW4280574486

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.