Evidence map›Paper›PMID 35585939›Full record

ArticleProceedings of SPIE--the International Society for Optical Engineering

Performance Assessment Framework for Neural Network Denoising.

Junyuan Li, Wenying Wang, Matthew Tivnan, J Webster Stayman, Grace J Gang

Abstract read
In one paragraph

Article in Proceedings of SPIE--the International Society for Optical Engineering. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Junyuan LiDepartment of Biomedical Engineering, Johns Hopkins University, Baltimore MD, USA 21205.
Wenying WangDepartment of Biomedical Engineering, Johns Hopkins University, Baltimore MD, USA 21205.
Matthew TivnanDepartment of Biomedical Engineering, Johns Hopkins University, Baltimore MD, USA 21205.
J Webster StaymanDepartment of Biomedical Engineering, Johns Hopkins University, Baltimore MD, USA 21205.
Grace J GangDepartment of Biomedical Engineering, Johns Hopkins University, Baltimore MD, USA 21205.

Funding

BIOMEDICAL ENGINEERING TRAINING PROGRAMT32GM007057 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI KANOLD, PATRICK O, KARCHIN, RACHEL · 1985 to 2023
$10.4M
Nonlinear performance analysis and prediction for robust low dose lung CTR01CA249538 · NCI · UNIVERSITY OF PENNSYLVANIA · PI GANG, JIANAN GRACE · 2021 to 2024
$2.0M
NCI NIH HHS R01 CA249538NIGMS NIH HHS T32 GM007057
6 · The paper itself

Abstract

The proliferation of deep learning image processing calls for a quantitative image quality assessment framework that is suitable for nonlinear, data-dependent algorithms. In this work, we propose a method to systematically evaluate the system and noise responses such that the nonlinear transfer properties can be mapped out. The method involves sampling of lesion perturbations as a function of size, contrast, as well as clinically relevant features such as shape and texture that may be important for diagnosis. We embed the perturbations in backgrounds of varying attenuation levels, noise magnitude and correlation that are associated with different patient anatomies and imaging protocols. The range of system and noise response are further used to evaluate performance for clinical tasks such as signal detection and classification. We performed the assessment for an example CNN-denoising algorithm for low does lung CT screening. The system response of the CNN-denoising algorithm exhibits highly nonlinear behavior where both contrast and higher order lesion features such as spiculated boundaries are not reliably represented for lesions perturbations with small size and low contrast. The noise properties are potentially highly nonstationary, and should be assumed to be the same between the signal-present and signal-absent images. Furthermore, we observer a high degree dependency of both system and noise response on the background attenuation levels. Inputs around zeros are effectively imposed a non-negativity constraint; transfer properties for higher background levels are highly variable. For a detection task, CNN-denoised images improved detectability index by 16-18% compared to low dose CT inputs. For classification task between spiculated and smooth lesions, CNN-denoised images result in a much larger improvement up to 50%. The performance assessment framework propose in this work can systematically map out the nonlinear transfer functions for deep learning algorithms and can potentially enable robust deployment of such algorithms in medical imaging applications.

Identifiers

PMID35585939
PMCPMC9113009

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.