Evidence map›Paper›PMID 35584695›Full record

ArticleMolecular cell2022

Mpe1 senses the binding of pre-mRNA and controls 3' end processing by CPF.

Juan B Rodríguez-Molina, Francis J O'Reilly, Holly Fagarasan, Eleanor Sheekey, Sarah Maslen, J Mark Skehel, Juri Rappsilber, Lori A Passmore

Open access · hybridAbstract readVideo-Audio Media
In one paragraph

Article in Molecular cell, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

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  12. Molecular Insights into mRNA Polyadenylation and Deadenylation.International journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Juan B Rodríguez-MolinaMRC Laboratory of Molecular Biology, Cambridge CB2 0QH, UK.
Francis J O'ReillyTechnische Universität Berlin, Chair of Bioanalytics, 10623 Berlin, Germany.
Holly FagarasanMRC Laboratory of Molecular Biology, Cambridge CB2 0QH, UK.
Eleanor SheekeyMRC Laboratory of Molecular Biology, Cambridge CB2 0QH, UK.
Sarah MaslenMRC Laboratory of Molecular Biology, Cambridge CB2 0QH, UK.
J Mark SkehelMRC Laboratory of Molecular Biology, Cambridge CB2 0QH, UK.
Juri RappsilberTechnische Universität Berlin, Chair of Bioanalytics, 10623 Berlin, Germany; Wellcome Centre for Cell Biology, University of Edinburgh, Edinburgh EH9 3BF, UK.
Lori A PassmoreMRC Laboratory of Molecular Biology, Cambridge CB2 0QH, UK. Electronic address: passmore@mrc-lmb.cam.ac.uk.
MRC Laboratory of Molecular Biology · GBTechnische Universität Berlin · DEWellcome Centre for Cell Biology · GB

Funding

Biotechnology and Biological Sciences Research CouncilMedical Research Council MC_U105184326Medical Research Council MC_U105192715Wellcome TrustWellcome Trust 203149
6 · The paper itself

Abstract

Most eukaryotic messenger RNAs (mRNAs) are processed at their 3' end by the cleavage and polyadenylation specificity factor (CPF/CPSF). CPF mediates the endonucleolytic cleavage of the pre-mRNA and addition of a polyadenosine (poly(A)) tail, which together define the 3' end of the mature transcript. The activation of CPF is highly regulated to maintain the fidelity of RNA processing. Here, using cryo-EM of yeast CPF, we show that the Mpe1 subunit directly contacts the polyadenylation signal sequence in nascent pre-mRNA. The region of Mpe1 that contacts RNA also promotes the activation of CPF endonuclease activity and controls polyadenylation. The Cft2 subunit of CPF antagonizes the RNA-stabilized configuration of Mpe1. In vivo, the depletion or mutation of Mpe1 leads to widespread defects in transcription termination by RNA polymerase II, resulting in transcription interference on neighboring genes. Together, our data suggest that Mpe1 plays a major role in accurate 3' end processing, activating CPF, and ensuring timely transcription termination.

Indexed as

mRNA Cleavage and Polyadenylation FactorsRNA PrecursorsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAmino Acid SequenceCryoelectron MicroscopyPolyadenylationProtein BindingProtein Structure, TertiaryRNA, MessengerMpe1 protein, S cerevisiaemRNA Cleavage and Polyadenylation FactorsRNA, MessengerRNA PrecursorsSaccharomyces cerevisiae Proteins3' end processingcryo-EMendonucleasemRNApolyadenylationpoly(A) tailpolymerasetranscriptiontranscription termination

Identifiers

PMID35584695
PMCPMC9380774
OpenAlexW4280508318

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.