Evidence map›Paper›PMID 35584631›Full record

ArticleCell reports. Medicine2022

Transcriptional profiling of macrophages in situ in metastatic melanoma reveals localization-dependent phenotypes and function.

Jan Martinek, Jianan Lin, Kyung In Kim, Victor G Wang, Te-Chia Wu, Michael Chiorazzi, Hannah Boruchov, Ananya Gulati, Shamreethaa Seeniraj, Lili Sun and 8 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports. Medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 28 citations in OpenAlex.

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  6. Innate Immune Cells in Melanoma: Implications for Immunotherapy.International journal of molecular sciences · 2024
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors at 3 institutions in 1 country.

Jan MartinekThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.
Jianan LinThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.
Kyung In KimThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.
Victor G WangThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA; Department of Genetics and Genome Sciences, UConn Health, Farmington, CT, USA.
Te-Chia WuThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.
Michael ChiorazziDepartment of Immunobiology, Yale University School of Medicine, Howard Hughes Medical Institute, New Haven, CT, USA.
Hannah BoruchovThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.
Ananya GulatiThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.
Shamreethaa SeenirajThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.
Lili SunThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.
Florentina MarchesThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.
Paul RobsonThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA; Department of Genetics and Genome Sciences, UConn Health, Farmington, CT, USA.
Anthony RongvauxFred Hutchinson Cancer Research Center, Program in Immunology, Seattle, WA, USA.
Richard A FlavellDepartment of Immunobiology, Yale University School of Medicine, Howard Hughes Medical Institute, New Haven, CT, USA.
Joshy GeorgeThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.
Jeffrey H ChuangThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.
Jacques BanchereauThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.
Karolina PaluckaThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA; Department of Genetics and Genome Sciences, UConn Health, Farmington, CT, USA. Electronic address: karolina.palucka@jax.org.
Jackson Laboratory · USHoward Hughes Medical Institute · USFred Hutch Cancer Center · US

Funding

Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI Mark D ADAMS · 1985 to 2026
$61.9M
(PQ3) Cellular and Molecular Mechanisms Driving Myeloid Compartment Variation in Human Triple Negative Breast CancerR01CA219880 · NCI · JACKSON LABORATORY · PI PALUCKA, ANNA KAROLINA · 2017 to 2021
$3.4M
Quantitative Computational Methods to Accurately Measure Tumor Heterogeneity in Solid Tumors to Inform Development of Evolution-based Treatment StrategiesR01CA230031 · NCI · JACKSON LABORATORY · PI CHUANG, JEFFREY HSU-MIN · 2018 to 2022
$2.6M
Towards True Precision Oncology: Validation of a Comprehensively Humanized, Autologous Mouse ModelR01CA204115 · NCI · WASHINGTON UNIVERSITY · PI FIELDS, RYAN C, FLAVELL, RICHARD A · 2017 to 2019
$1.8M
Humanized mouse models to dissect in vivo the interplay between melanoma and the immune systemR01CA195712 · NCI · JACKSON LABORATORY · PI FLAVELL, RICHARD A, PALUCKA, ANNA KAROLINA · 2015 to 2017
$1.3M
Autologous Humanized Mouse Model of Non-Small Cell Lung Cancer (NSCLC) to Investigate the Tumor-Immune Landscape and Its Response to TreatmentK08CA245211 · NCI · YALE UNIVERSITY · PI CHIORAZZI, MICHAEL · 2019 to 2023
$741k
NCI NIH HHS K08 CA245211NCI NIH HHS P30 CA034196NCI NIH HHS R01 CA195712NCI NIH HHS R01 CA204115NCI NIH HHS R01 CA219880NCI NIH HHS R01 CA230031
6 · The paper itself

Abstract

Modulation of immune function at the tumor site could improve patient outcomes. Here, we analyze patient samples of metastatic melanoma, a tumor responsive to T cell-based therapies, and find that tumor-infiltrating T cells are primarily juxtaposed to CD14

Indexed as

MelanomaNeoplasms, Second PrimarySkin NeoplasmsHumansMacrophagesPhenotypeT-LymphocytesCD205DEC-205dendritic cellsLY75macrophagemelanomamyeloid infiltratespatial analysisspatial tissue organizationtranscriptomics

Identifiers

PMID35584631
PMCPMC9133468
OpenAlexW4280536181

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.