Evidence map›Paper›PMID 35581550›Full record

ArticleBMC genomics2022

Deciphering resistance to Zymoseptoria tritici in the Tunisian durum wheat landrace accession 'Agili39'.

Sahbi Ferjaoui, Lamia Aouini, Rim B Slimane, Karim Ammar, Suzanne Dreisigacker, Henk J Schouten, Suraj Sapkota, Bochra A Bahri, Sarrah Ben M'Barek, Richard G F Visser and 2 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

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  7. Multi-stage resistance toFrontiers in plant science · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 4 countries.

Sahbi Ferjaoui *Laboratory of Bioaggressors and Integrated Protection in Agriculture (BPIA), National Institute of Agronomy of Tunisia (INAT), 43 Avenue Charles Nicolle, 1082 El Mahrajène, Tunis, Tunisia.
Lamia Aouini *Bio-Interaction and Plant Health, Wageningen University and Research, PO Box 16, 6700AA, Wageningen, The Netherlands.
Rim B SlimaneLaboratory of Bioaggressors and Integrated Protection in Agriculture (BPIA), National Institute of Agronomy of Tunisia (INAT), 43 Avenue Charles Nicolle, 1082 El Mahrajène, Tunis, Tunisia.
Karim AmmarInternational Maize and Wheat Improvement Center (CIMMYT), Apdo. Postal 6‑641, 06600, Mexico, D.F., Mexico.
Suzanne DreisigackerInternational Maize and Wheat Improvement Center (CIMMYT), Apdo. Postal 6‑641, 06600, Mexico, D.F., Mexico.
Henk J SchoutenPlant Breeding, Wageningen University and Research, P.O. Box 386, 6700 AJ, Wageningen, The Netherlands.
Suraj SapkotaInstitute of Plant Breeding, Genetics and Genomics, Department of Plant Pathology and Institute of Plant Breeding, University of Georgia, Griffin, GA, 30223, USA.
Bochra A BahriLaboratory of Bioaggressors and Integrated Protection in Agriculture (BPIA), National Institute of Agronomy of Tunisia (INAT), 43 Avenue Charles Nicolle, 1082 El Mahrajène, Tunis, Tunisia.
Sarrah Ben M'BarekCRP-Wheat Septoria Phenotyping Platform (CIMMYT-IRESA), Regional Field Crops Research Center of Beja (CRRGC), BP 350, 9000, Beja, Tunisia.
Richard G F VisserPlant Breeding, Wageningen University and Research, P.O. Box 386, 6700 AJ, Wageningen, The Netherlands.
Gert H J KemaBio-Interaction and Plant Health, Wageningen University and Research, PO Box 16, 6700AA, Wageningen, The Netherlands.
Sonia HamzaLaboratory of Bioaggressors and Integrated Protection in Agriculture (BPIA), National Institute of Agronomy of Tunisia (INAT), 43 Avenue Charles Nicolle, 1082 El Mahrajène, Tunis, Tunisia. hamza.sonia@inat.agrinet.tn.
Wageningen University & Research · NLInstitut National Agronomique de Tunisie · TNCentro Internacional de Mejoramiento de Maíz Y Trigo · MXUniversity of Georgia · USResearch and Technology Center of Energy · TN

Funding

Monsanto's Beachell-Borlaug International Scholars Program 3340030501)
6 · The paper itself

Abstract

backgroundSeptoria tritici blotch (STB), caused by Zymoseptoria tritici (Z. tritici), is an important biotic threat to durum wheat in the entire Mediterranean Basin. Although most durum wheat cultivars are susceptible to Z. tritici, research in STB resistance in durum wheat has been limited.

resultsIn our study, we have identified resistance to a wide array of Z. tritici isolates in the Tunisian durum wheat landrace accession 'Agili39'. Subsequently, a recombinant inbred population was developed and tested under greenhouse conditions at the seedling stage with eight Z. tritici isolates and for five years under field conditions with three Z. tritici isolates. Mapping of quantitative trait loci (QTL) resulted in the identification of two major QTL on chromosome 2B designated as Qstb2B_1 and Qstb2B_2. The Qstb2B_1 QTL was mapped at the seedling and the adult plant stage (highest LOD 33.9, explained variance 61.6%), conferring an effective resistance against five Z. tritici isolates. The Qstb2B_2 conferred adult plant resistance (highest LOD 32.9, explained variance 42%) and has been effective at the field trials against two Z. tritici isolates. The physical positions of the flanking markers linked to Qstb2B_1 and Qstb2B_2 indicate that these two QTL are 5 Mb apart. In addition, we identified two minor QTL on chromosomes 1A (Qstb1A) and chromosome 7A (Qstb7A) (highest LODs 4.6 and 4.0, and explained variances of 16% and 9%, respectively) that were specific to three and one Z. tritici isolates, respectively. All identified QTL were derived from the landrace accession Agili39 that represents a valuable source for STB resistance in durum wheat.

conclusionThis study demonstrates that Z. tritici resistance in the 'Agili39' landrace accession is controlled by two minor and two major QTL acting in an additive mode. We also provide evidence that the broad efficacy of the resistance to STB in 'Agili 39' is due to a natural pyramiding of these QTL. A sustainable use of this Z. tritici resistance source and a positive selection of the linked markers to the identified QTL will greatly support effective breeding for Z. tritici resistance in durum wheat.

Indexed as

Disease ResistanceTriticumAscomycotaPlant BreedingPlant DiseasesSeedlingsDurum wheatGene efficacyGene pyramidingLandracesMycosphaerella graminicola quantitative trait loci (QTL)QTL epistasisZymoseptoria tritici

Identifiers

PMID35581550
PMCPMC9112612
OpenAlexW4280527910

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.