Evidence map›Paper›PMID 35579969›Full record

ArticleGut microbes

Arginine-mediated gut microbiome remodeling promotes host pulmonary immune defense against nontuberculous mycobacterial infection.

Young Jae Kim, June-Young Lee, Jae Jin Lee, Sang Min Jeon, Prashanta Silwal, In Soo Kim, Hyeon Ji Kim, Cho Rong Park, Chaeuk Chung, Jeong Eun Han and 13 more

Open access · goldAbstract read
In one paragraph

Article in Gut microbes. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it, 56 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 5 institutions in 3 countries.

Young Jae KimDepartment of Microbiology, Chungnam National University School of Medicine Daejeon, Korea.
June-Young LeeDepartment of Life and Nanopharmaceutical Sciences and Department of Biology, Kyung Hee University, Seoul, Korea.ORCID 0000-0002-6793-6108
Jae Jin LeeDepartment of Molecular Microbiology and Immunology, Keck School of Medicine, University of Southern California CA, USA.
Sang Min JeonDepartment of Microbiology, Chungnam National University School of Medicine Daejeon, Korea.
Prashanta SilwalDepartment of Microbiology, Chungnam National University School of Medicine Daejeon, Korea.ORCID 0000-0002-8332-024X
In Soo KimDepartment of Microbiology, Chungnam National University School of Medicine Daejeon, Korea.
Hyeon Ji KimDepartment of Microbiology, Chungnam National University School of Medicine Daejeon, Korea.
Cho Rong ParkDepartment of Microbiology, Chungnam National University School of Medicine Daejeon, Korea.
Chaeuk ChungInfection Control Convergence Research Center, Chungnam National University School of Medicine Daejeon, Korea.
Jeong Eun HanDepartment of Life and Nanopharmaceutical Sciences and Department of Biology, Kyung Hee University, Seoul, Korea.
Jee-Won ChoiDepartment of Life and Nanopharmaceutical Sciences and Department of Biology, Kyung Hee University, Seoul, Korea.
Euon Jung TakDepartment of Life and Nanopharmaceutical Sciences and Department of Biology, Kyung Hee University, Seoul, Korea.
Ji-Ho YooDepartment of Biomedical and Pharmaceutical Sciences, Kyung Hee University, Seoul, Korea.
Su-Won JeongDepartment of Life and Nanopharmaceutical Sciences and Department of Biology, Kyung Hee University, Seoul, Korea.
Do-Yeon KimDepartment of Life and Nanopharmaceutical Sciences and Department of Biology, Kyung Hee University, Seoul, Korea.
Warisa KetphanDepartment of Molecular Microbiology and Immunology, Keck School of Medicine, University of Southern California CA, USA.
Su-Young KimDivision of Pulmonary and Critical Care Medicine, Department of Medicine, Samsung Medical Center, Sungkyunkwan University School of Medicine Seoul, South Korea.
Byung Woo JhunDivision of Pulmonary and Critical Care Medicine, Department of Medicine, Samsung Medical Center, Sungkyunkwan University School of Medicine Seoul, South Korea.
Jake WhangKorea Mycobacterium Resource Center (KMRC) & Basic Research Section, The Korean Institute of Tuberculosis (KIT), Cheongju, Korea.ORCID 0000-0003-4444-508X
Jin-Man KimDepartment of Pathology, Chungnam National University School of Medicine, Daejeon, Korea.
Hyungjin EohDepartment of Molecular Microbiology and Immunology, Keck School of Medicine, University of Southern California CA, USA.
Jin-Woo BaeDepartment of Life and Nanopharmaceutical Sciences and Department of Biology, Kyung Hee University, Seoul, Korea.
Eun-Kyeong JoDepartment of Microbiology, Chungnam National University School of Medicine Daejeon, Korea.ORCID 0000-0001-7191-0587
Chungnam National University · KRKyung Hee University · KRUniversity of Southern California · USSamsung Medical Center · KRNovosibirsk Tuberculosis Research Institute · RU

Funding

Metabolic compensation in Mycobacterium tuberculosis for the formation of persistersR21AI139386 · NIAID · UNIVERSITY OF SOUTHERN CALIFORNIA · PI EOH, HYUNGJIN · 2019 to 2020
$454k
PknG mediated tailoring Mycobacterium tuberculosis adaptive metabolism is required for the persister formationR56AI143870 · NIAID · UNIVERSITY OF SOUTHERN CALIFORNIA · PI EOH, HYUNGJIN · 2019 to 2019
$413k
NIAID NIH HHS R21 AI139386NIAID NIH HHS R56 AI143870
6 · The paper itself

Abstract

Nontuberculous mycobacterial pulmonary diseases (NTM-PDs) are emerging as global health threats with issues of antibiotic resistance. Accumulating evidence suggests that the gut-lung axis may provide novel candidates for host-directed therapeutics against various infectious diseases. However, little is known about the gut-lung axis in the context of host protective immunity to identify new therapeutics for NTM-PDs. This study was performed to identify gut microbes and metabolites capable of conferring pulmonary immunity to NTM-PDs. Using metabolomics analysis of sera from NTM-PD patients and mouse models, we showed that the levels of l-arginine were decreased in sera from NTM-PD patients and NTM-infected mice. Oral administration of l-arginine significantly enhanced pulmonary antimicrobial activities with the expansion of IFN-γ-producing effector T cells and a shift to microbicidal (M1) macrophages in the lungs of NTM-PD model mice. Mice that received fecal microbiota transplants from l-arginine-treated mice showed increased protective host defense in the lungs against NTM-PD, whereas l-arginine-induced pulmonary host defense was attenuated in mice treated with antibiotics. Using 16S rRNA sequencing, we further showed that l-arginine administration resulted in enrichment of the gut microbiota composition with

Indexed as

Gastrointestinal MicrobiomeMycobacterium Infections, NontuberculousAnimalsAnti-Bacterial AgentsArginineHumansLungMiceRNA, Ribosomal, 16SAnti-Bacterial AgentsArginineRNA, Ribosomal, 16Sgut microbiotahost defensel-arginineNontuberculous mycobacteria

Identifiers

PMID35579969
PMCPMC9116420
OpenAlexW4280512407

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.