Evidence map›Paper›PMID 35579461›Full record

ArticleMicrobiology spectrum2022

Genomic Degeneration and Reduction in the Fish Pathogen

D T Gauthier, J H Doss, M LaGatta, T Gupta, R K Karls, F D Quinn

Abstract read
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

D T GauthierDepartment of Biological Sciences, Old Dominion Universitygrid.261368.8, Norfolk, Virginia, USA.ORCID 0000-0002-2301-7150
J H DossDepartment of Biological Sciences, Old Dominion Universitygrid.261368.8, Norfolk, Virginia, USA.
M LaGattaDepartment of Infectious Diseases, University of Georgiagrid.213876.9, Athens, Georgia, USA.
T GuptaDepartment of Infectious Diseases, University of Georgiagrid.213876.9, Athens, Georgia, USA.
R K KarlsDepartment of Infectious Diseases, University of Georgiagrid.213876.9, Athens, Georgia, USA.
F D QuinnDepartment of Infectious Diseases, University of Georgiagrid.213876.9, Athens, Georgia, USA.

Funding

A novel live intranasal TB vaccineR41AI100457 · NIAID · PATHENS, INC. · PI QUINN, FREDERICK D · 2012 to 2013
$600k
NIAID NIH HHS R41 AI100457
6 · The paper itself

Abstract

Mycobacterium shottsii is a dysgonic, nonpigmented mycobacterium originally isolated from diseased striped bass (Morone saxatilis) in the Chesapeake Bay, USA. Genomic analysis reveals that M. shottsii is a Mycobacterium ulcerans/Mycobacterium marinum clade (MuMC) member, but unlike the superficially similar M. pseudoshottsii, also isolated from striped bass, it is not an M. ulcerans ecovar, instead belonging to a transitional group of strains basal to proposed "Aronson" and "M" lineages. Although phylogenetically distinct from the human pathogen M. ulcerans, the

Indexed as

BassMycobacterium InfectionsMycobacterium marinumMycobacterium tuberculosisAnimalsDNA Transposable ElementsGenomicsMycobacteriumPhylogenyDNA Transposable ElementsgenomemycobacteriaMycobacterium shottsii

Identifiers

PMID35579461
PMCPMC9241763

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.