Evidence map›Paper›PMID 35579427›Full record

ArticleeLife2022

Active site geometry stabilization of a presenilin homolog by the lipid bilayer promotes intramembrane proteolysis.

Lukas P Feilen, Shu-Yu Chen, Akio Fukumori, Regina Feederle, Martin Zacharias, Harald Steiner

Open access · goldAbstract read
In one paragraph

Article in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Lukas P FeilenGerman Center for Neurodegenerative Diseases, Munich, Germany.ORCID 0000-0001-8221-6742
Shu-Yu ChenCenter of Functional Protein Assemblies and Physics Department T38, Technical University of Munich, Garching, Germany.
Akio FukumoriDepartment of Pharmacotherapeutics II, Osaka Medical and Pharmaceutical University, Takatsuki, Japan.
Regina FeederleGerman Center for Neurodegenerative Diseases, Munich, Germany.ORCID 0000-0002-3981-367X
Martin ZachariasCenter of Functional Protein Assemblies and Physics Department T38, Technical University of Munich, Garching, Germany.ORCID 0000-0001-5163-2663
Harald SteinerGerman Center for Neurodegenerative Diseases, Munich, Germany.ORCID 0000-0003-3935-0318
German Center for Neurodegenerative Diseases · DETechnical University of Munich · DEOsaka University of Pharmaceutical Sciences · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cleavage of membrane proteins in the lipid bilayer by intramembrane proteases is crucial for health and disease. Although different lipid environments can potently modulate their activity, how this is linked to their structural dynamics is unclear. Here, we show that the carboxy-peptidase-like activity of the archaeal intramembrane protease PSH, a homolog of the Alzheimer's disease-associated presenilin/γ-secretase is impaired in micelles and promoted in a lipid bilayer. Comparative molecular dynamics simulations revealed that important elements for substrate binding such as transmembrane domain 6a of PSH are more labile in micelles and stabilized in the lipid bilayer. Moreover, consistent with an enhanced interaction of PSH with a transition-state analog inhibitor, the bilayer promoted the formation of the enzyme's catalytic active site geometry. Our data indicate that the lipid environment of an intramembrane protease plays a critical role in structural stabilization and active site arrangement of the enzyme-substrate complex thereby promoting intramembrane proteolysis.

Indexed as

Alzheimer DiseasePresenilinsAmyloid beta-Protein PrecursorAmyloid Precursor Protein SecretasesArchaeaArchaeal ProteinsCatalytic DomainHumansLipid BilayersMicellesPresenilin-1ProteolysisAmyloid beta-Protein PrecursorAmyloid Precursor Protein SecretasesArchaeal ProteinsLipid BilayersMicellesPresenilin-1Presenilinsamyloid β-peptidebiochemistrychemical biologyintramembrane proteolysismolecular biophysicsnonepresenilinPSHstructural biologyγ-secretase

Identifiers

PMID35579427
PMCPMC9282858
OpenAlexW4280500838

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.