Evidence map›Paper›PMID 35577811›Full record

ArticleNature communications2022

Structural anatomy of Protein Kinase C C1 domain interactions with diacylglycerol and other agonists.

Sachin S Katti, Inna V Krieger, Jihyae Ann, Jeewoo Lee, James C Sacchettini, Tatyana I Igumenova

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
3.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 50 citations in OpenAlex.

  1. Positive selection screen identifies natural product β-catenin inactivators.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  2. Jatrophane Diterpenoids fromMolecules (Basel, Switzerland) · 2026
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  3. Review
  4. Design of PKC-Targeting Benzolactams as Gli Inhibitors.ACS medicinal chemistry letters · 2026
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  5. Ingenane Diterpenoids fromMolecules (Basel, Switzerland) · 2026
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  6. Evolution of a Synthetic Strategy for Complex Diterpenes fromJournal of the American Chemical Society · 2026
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  7. Article
  8. Article
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  10. Review
  11. Genome-wide analysis of DC1 domain proteins inFrontiers in plant science · 2026
    Article
  12. Article
  13. Review
  14. CaThe journal of physical chemistry. B · 2025
    Article
  15. Article
  16. Wnt/CaOncology letters · 2025
    Review
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  18. Unraveling the Molecular Mechanisms of ABHD5 Membrane Targeting.bioRxiv : the preprint server for biology · 2025
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Sachin S KattiDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX, 77840, USA.
Inna V KriegerDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX, 77840, USA.ORCID 0000-0001-7144-3069
Jihyae AnnCollege of Pharmacy, Seoul National University, Seoul, 08826, Republic of Korea.ORCID 0000-0002-5043-8014
Jeewoo LeeCollege of Pharmacy, Seoul National University, Seoul, 08826, Republic of Korea.ORCID 0000-0002-7832-6719
James C SacchettiniDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX, 77840, USA.ORCID 0000-0001-5767-2367
Tatyana I IgumenovaDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX, 77840, USA. Tatyana.Igumenova@ag.tamu.edu.ORCID 0000-0003-3772-7484
Texas A&M University · USSeoul National University · KR

Funding

Structural and Functional Studies of Protein Kinase C RegulationR01GM108998 · NIGMS · TEXAS A&M AGRILIFE RESEARCH · PI Tatyana I. Igumenova · 2014 to 2026
$3.3M
NIGMS NIH HHS R01 GM108998
6 · The paper itself

Abstract

Diacylglycerol (DAG) is a versatile lipid whose 1,2-sn-stereoisomer serves both as second messenger in signal transduction pathways that control vital cellular processes, and as metabolic precursor for downstream signaling lipids such as phosphatidic acid. Effector proteins translocate to available DAG pools in the membranes by using conserved homology 1 (C1) domains as DAG-sensing modules. Yet, how C1 domains recognize and capture DAG in the complex environment of a biological membrane has remained unresolved for the 40 years since the discovery of Protein Kinase C (PKC) as the first member of the DAG effector cohort. Herein, we report the high-resolution crystal structures of a C1 domain (C1B from PKCδ) complexed to DAG and to each of four potent PKC agonists that produce different biological readouts and that command intense therapeutic interest. This structural information details the mechanisms of stereospecific recognition of DAG by the C1 domains, the functional properties of the lipid-binding site, and the identities of the key residues required for the recognition and capture of DAG and exogenous agonists. Moreover, the structures of the five C1 domain complexes provide the high-resolution guides for the design of agents that modulate the activities of DAG effector proteins.

Indexed as

DiglyceridesProtein Kinase CAnimalsCell MembraneProtein BindingProtein Structure, TertiaryRatsDiglyceridesProtein Kinase C

Identifiers

PMID35577811
PMCPMC9110374
OpenAlexW4280603822

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.