Evidence map›Paper›PMID 35577788›Full record

ArticleNature communications2022

Identification of a modulator of the actin cytoskeleton, mitochondria, nutrient metabolism and lifespan in yeast.

Cierra N Sing, Enrique J Garcia, Thomas G Lipkin, Thomas M Huckaba, Catherine A Tsang, Arielle C Coughlin, Emily J Yang, Istvan R Boldogh, Ryo Higuchi-Sanabria, Liza A Pon

Abstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Alterations of actin in aging.Journal of cell science · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Cierra N SingDepartment of Pathology and Cell Biology, Columbia University, New York, NY, 10032, USA.
Enrique J GarciaDepartment of Pathology and Cell Biology, Columbia University, New York, NY, 10032, USA.
Thomas G LipkinDepartment of Pathology and Cell Biology, Columbia University, New York, NY, 10032, USA.
Thomas M HuckabaDepartment of Pathology and Cell Biology, Columbia University, New York, NY, 10032, USA.ORCID 0000-0002-6711-9175
Catherine A TsangDepartment of Pathology and Cell Biology, Columbia University, New York, NY, 10032, USA.
Arielle C CoughlinDepartment of Pathology and Cell Biology, Columbia University, New York, NY, 10032, USA.
Emily J YangDepartment of Pathology and Cell Biology, Columbia University, New York, NY, 10032, USA.ORCID 0000-0002-9900-7389
Istvan R BoldoghDepartment of Pathology and Cell Biology, Columbia University, New York, NY, 10032, USA.
Ryo Higuchi-SanabriaDepartment of Pathology and Cell Biology, Columbia University, New York, NY, 10032, USA.
Liza A PonDepartment of Pathology and Cell Biology, Columbia University, New York, NY, 10032, USA. lap5@cumc.columbia.edu.

Funding

Tumor Biology and Microenvironment ProgramP30CA013696 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI Anil K Rustgi · 1985 to 2026
$115.3M
NUTRITIONT32DK007647 · NIDDK · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI Anthony W Ferrante, Lori M Zeltser · 1990 to 2026
$7.4M
Mitochondrial inheritance and quality controlR35GM122589 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Liza A Pon · 2017 to 2026
$5.1M
The Role of Actin in Cellular AgingR33AG051047 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI PON, LIZA A · 2018 to 2020
$1.4M
More than just a load control: cytoskeletal form and function during agingR00AG065200 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI HIGUCHI-SANABRIA, RYO · 2021 to 2023
$747k
Super-resolution structured illumination microscopeS10OD014584 · OD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI PON, LIZA A · 2013 to 2013
$579k
The Role of Actin in Cellular AgingR21AG051047 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI PON, LIZA A · 2016 to 2017
$427k
More than just a load control: cytoskeletal form and function during agingK99AG065200 · NIA · UNIVERSITY OF CALIFORNIA BERKELEY · PI HIGUCHI-SANABRIA, RYO · 2020 to 2021
$244k
Molecular and Therapeutic Mechanisms of a new model of Congenital Muscular DystrophyF31AR070013 · NIAMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GARCIA, ENRIQUE JOSE · 2016 to 2019
$190k
Mitochondria-cytoskeleton communication and function in agingF31AG055326 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SING, CIERRA NICOLE · 2016 to 2020
$179k
NCI NIH HHS P30 CA013696NIAMS NIH HHS F31 AR070013NIA NIH HHS F31 AG055326NIA NIH HHS K99 AG065200NIA NIH HHS R00 AG065200NIA NIH HHS R21 AG051047NIA NIH HHS R33 AG051047NIDDK NIH HHS T32 DK007647NIGMS NIH HHS R35 GM122589NIH HHS S10 OD014584
6 · The paper itself

Abstract

In yeast, actin cables are F-actin bundles that are essential for cell division through their function as tracks for cargo movement from mother to daughter cell. Actin cables also affect yeast lifespan by promoting transport and inheritance of higher-functioning mitochondria to daughter cells. Here, we report that actin cable stability declines with age. Our genome-wide screen for genes that affect actin cable stability identified the open reading frame YKL075C. Deletion of YKL075C results in increases in actin cable stability and abundance, mitochondrial fitness, and replicative lifespan. Transcriptome analysis revealed a role for YKL075C in regulating branched-chain amino acid (BCAA) metabolism. Consistent with this, modulation of BCAA metabolism or decreasing leucine levels promotes actin cable stability and function in mitochondrial quality control. Our studies support a role for actin stability in yeast lifespan, and demonstrate that this process is controlled by BCAA and a previously uncharacterized ORF YKL075C, which we refer to as actin, aging and nutrient modulator protein 1 (AAN1).

Indexed as

Actin CytoskeletonLongevityMitochondriaSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsActinsNutrientsActinsNutrientsSaccharomyces cerevisiae Proteins

Identifiers

PMID35577788
PMCPMC9110415

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.