Evidence map›Paper›PMID 35576528›Full record

ArticleACS chemical biology2022

Fluorescence-Based Activity Screening Assay Reveals Small Molecule Inhibitors of Vaccinia Virus mRNA Decapping Enzyme D9.

Marcelina Bednarczyk, Jessica K Peters, Renata Kasprzyk, Jagoda Starek, Marcin Warminski, Tomasz Spiewla, Jeffrey S Mugridge, John D Gross, Jacek Jemielity, Joanna Kowalska

Open access · hybridAbstract read
In one paragraph

Article in ACS chemical biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. The strategies and advances of mRNA translation booster.Asian journal of pharmaceutical sciences · 2025
    Review
  3. Exploring the Dynamics ofCurrent medicinal chemistry · 2025
    Article
  4. Article
  5. Photoactivatable mRNA 5' Cap Analogs for RNA-Protein Crosslinking.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Marcelina BednarczykDivision of Biophysics, Institute of Experimental Physics, Faculty of Physics, University of Warsaw, Pasteura 5, Warsaw 02-093, Poland.ORCID 0000-0002-8246-1243
Jessica K PetersDepartment of Pharmaceutical Chemistry, University of California, San Francisco, California 94158, United States.
Renata KasprzykCentre of New Technologies, University of Warsaw, Banacha 2C, Warsaw 02-097, Poland.
Jagoda StarekDivision of Biophysics, Institute of Experimental Physics, Faculty of Physics, University of Warsaw, Pasteura 5, Warsaw 02-093, Poland.
Marcin WarminskiDivision of Biophysics, Institute of Experimental Physics, Faculty of Physics, University of Warsaw, Pasteura 5, Warsaw 02-093, Poland.ORCID 0000-0002-1071-3405
Tomasz SpiewlaDivision of Biophysics, Institute of Experimental Physics, Faculty of Physics, University of Warsaw, Pasteura 5, Warsaw 02-093, Poland.
Jeffrey S MugridgeDepartment of Pharmaceutical Chemistry, University of California, San Francisco, California 94158, United States.
John D GrossDepartment of Pharmaceutical Chemistry, University of California, San Francisco, California 94158, United States.
Jacek JemielityCentre of New Technologies, University of Warsaw, Banacha 2C, Warsaw 02-097, Poland.ORCID 0000-0001-7633-788X
Joanna KowalskaDivision of Biophysics, Institute of Experimental Physics, Faculty of Physics, University of Warsaw, Pasteura 5, Warsaw 02-093, Poland.ORCID 0000-0002-9174-7999
University of Warsaw · PLUniversity of California, San Francisco · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vaccinia virus (VACV) represents a family of poxviruses, which possess their own decapping machinery as a part of their strategy to eliminate host mRNAs and evade the innate immune response. D9 is one of the two encoded VACV decapping enzymes that is responsible for cap removal from the 5' end of both host mRNA transcripts and viral double-stranded RNAs. Little is known about the structural requirements for D9 inhibition by small molecules. Here, we identified a minimal D9 substrate and used it to develop a real-time fluorescence assay for inhibitor discovery and characterization. We screened a panel of nucleotide-derived substrate analogues and pharmacologically active candidates to identify several compounds with nano- and low micromolar IC

Indexed as

Vaccinia virusViral ProteinsEndoribonucleasesFluorescenceHumansNucleotidesRNA CapsRNA, MessengerEndoribonucleasesmRNA decapping enzymesNucleotidesRNA CapsRNA, MessengerViral Proteins

Identifiers

PMID35576528
PMCPMC9207806
OpenAlexW4280509045

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.