Evidence map›Paper›PMID 35573477›Full record

ArticleSTAR protocols2022

Whole-genome sequencing and mutational analysis of human cord-blood derived stem and progenitor cells.

Axel Rosendahl Huber, Anaïs J C N van Leeuwen, Flavia Peci, Jurrian K de Kanter, Eline J M Bertrums, Ruben van Boxtel

Abstract read
In one paragraph

Article in STAR protocols, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Axel Rosendahl HuberPrincess Máxima Center for Pediatric Oncology and Oncode Institute, Heidelberglaan 25, 3584 CS Utrecht, the Netherlands.
Anaïs J C N van LeeuwenPrincess Máxima Center for Pediatric Oncology and Oncode Institute, Heidelberglaan 25, 3584 CS Utrecht, the Netherlands.
Flavia PeciPrincess Máxima Center for Pediatric Oncology and Oncode Institute, Heidelberglaan 25, 3584 CS Utrecht, the Netherlands.
Jurrian K de KanterPrincess Máxima Center for Pediatric Oncology and Oncode Institute, Heidelberglaan 25, 3584 CS Utrecht, the Netherlands.
Eline J M BertrumsPrincess Máxima Center for Pediatric Oncology and Oncode Institute, Heidelberglaan 25, 3584 CS Utrecht, the Netherlands.
Ruben van BoxtelPrincess Máxima Center for Pediatric Oncology and Oncode Institute, Heidelberglaan 25, 3584 CS Utrecht, the Netherlands.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mutational signatures have been identified in cancer genomes, providing information about the causes of cancer and treatment vulnerabilities. This protocol describes an assay to determine the genotoxic mechanisms underlying these signatures using cord-blood derived hematopoietic stem and progenitor cells (CB-HSPCs). CB-HSPCs have a low mutation background, enabling sensitive detection of mutations. First, CB-HSPCs are exposed

Indexed as

Fetal BloodHematopoietic Stem CellsDNA DamageGenomeHumansWhole Genome SequencingBioinformaticsCancerCell isolationFlow Cytometry/Mass CytometryGenomicsMolecular BiologySequence analysisSequencingSingle CellStem Cells

Identifiers

PMID35573477
PMCPMC9092504

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.