Evidence map›Paper›PMID 35573391›Full record

ArticleFEMS microbes2022

Great diversity of KS

Paris S Salazar-Hamm, Jennifer J Marshall Hathaway, Ara S Winter, Nicole A Caimi, Debbie C Buecher, Ernest W Valdez, Diana E Northup

Open access · goldAbstract read
In one paragraph

Article in FEMS microbes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Bacterial Composition Across Bat Species: A Human Health Perspective.Animals : an open access journal from MDPI · 2025
    Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Paris S Salazar-HammDepartment of Biology, University of New Mexico, Albuquerque, NM 87131-0001, USA.ORCID https://orcid.org/0000-0002-6168-5723
Jennifer J Marshall HathawayDepartment of Biology, University of New Mexico, Albuquerque, NM 87131-0001, USA.
Ara S WinterDepartment of Biology, University of New Mexico, Albuquerque, NM 87131-0001, USA.
Nicole A CaimiDepartment of Biology, University of New Mexico, Albuquerque, NM 87131-0001, USA.
Debbie C BuecherBuecher Biological Consulting, Tucson, AZ 85715, USA.
Ernest W ValdezDepartment of Biology, University of New Mexico, Albuquerque, NM 87131-0001, USA.
Diana E NorthupDepartment of Biology, University of New Mexico, Albuquerque, NM 87131-0001, USA.
University of New Mexico · USUnited States Geological Survey · US

Funding

Pilot Project ProgramP30GM110907 · NIGMS · UNIVERSITY OF NEW MEXICO · PI LOKER, ERIC SAMUEL · 2014 to 2018
$5.4M
NIGMS NIH HHS P30 GM110907
6 · The paper itself

Abstract

Polyketide synthases (PKSs) are multidomain enzymes in microorganisms that synthesize complex, bioactive molecules. PKS II systems are iterative, containing only a single representative of each domain: ketosynthase alpha (KS[Formula: see text]), ketosynthase beta and the acyl carrier protein. Any gene encoding for one of these domains is representative of an entire PKS II biosynthetic gene cluster (BGC). Bat skin surfaces represent an extreme environment prolific in Actinobacteria that may constitute a source for bioactive molecule discovery. KS[Formula: see text] sequences were obtained from culturable bacteria from bats in the southwestern United States. From 467 bat bacterial isolates, we detected 215 (46%) had KS[Formula: see text] sequences. Sequencing yielded 210 operational taxonomic units, and phylogenetic placement found 45 (21%) shared <85% homology to characterized metabolites. Additionally, 16 Actinobacteria genomes from the bat microbiome were analyzed for biosynthetic capacity. A range of 69-93% of the BGCs were novel suggesting the bat microbiome may contain valuable uncharacterized natural products. Documenting and characterizing these are important in understanding the susceptibility of bats to emerging infectious diseases, such as white-nose syndrome. Also noteworthy was the relationship between KS [Formula: see text] homology and total BGC novelty within each fully sequenced strain. We propose amplification and detection of KS[Formula: see text] could predict a strain's global biosynthetic capacity.

Indexed as

Actinobacteriabatsmicrobiotanatural productsPKS II (type two polyketide synthases)Streptomyces

Identifiers

PMID35573391
PMCPMC9097503
OpenAlexW4223896550

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.