Evidence map›Paper›PMID 35573199›Full record

ArticleiScience2022

Whole genome sequencing of cyanobacterium

Yuguang Liu, Patricio Jeraldo, William Herbert, Samantha McDonough, Bruce Eckloff, Dirk Schulze-Makuch, Jean-Pierre de Vera, Charles Cockell, Thomas Leya, Mickael Baqué and 2 more

Abstract read
In one paragraph

Article in iScience, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
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  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Yuguang LiuDepartment of Surgery, Division of Surgical Research, Mayo Clinic, Rochester, MN 55905, USA.
Patricio JeraldoDepartment of Surgery, Division of Surgical Research, Mayo Clinic, Rochester, MN 55905, USA.
William HerbertMicrobiome Program, Center for Individualized Medicine, Mayo Clinic, Rochester, MN 55905, USA.
Samantha McDonoughMedical Genome Facility, Center for Individualized Medicine, Mayo Clinic, Rochester, MN 55905, USA.
Bruce EckloffMedical Genome Facility, Center for Individualized Medicine, Mayo Clinic, Rochester, MN 55905, USA.
Dirk Schulze-MakuchAstrobiology Group, Center for Astronomy and Astrophysics, Technische Universität Berlin, Hardenbergstr. 36, 10623 Berlin, Germany.
Jean-Pierre de VeraSpace Operations and Astronaut Training, Microgravity User Support Center (MUSC), German Aerospace Center (DLR), Linder Höhe, 51147 Köln, Germany.
Charles CockellSchool of Physics and Astronomy, University of Edinburgh, Edinburgh EH9 3FD, UK.
Thomas LeyaFraunhofer Institute for Cell Therapy and Immunology, Branch Bioanalytics and Bioprocesses (IZI-BB), Extremophile Research & Biobank CCCryo, 14476 Potsdam, Germany.
Mickael BaquéAstrobiological Laboratories, Planetary Laboratories Department, Institute of Planetary Research, German Aerospace Center (DLR), 12489 Berlin, Germany.
Jin JenMedical Genome Facility, Center for Individualized Medicine, Mayo Clinic, Rochester, MN 55905, USA.
Marina Walther-AntonioDepartment of Surgery, Division of Surgical Research, Mayo Clinic, Rochester, MN 55905, USA.

Funding

Institutional Career Development CoreKL2TR002379 · NCATS · MAYO CLINIC ROCHESTER · PI NILUFER ERTEKIN-TANER · 2017 to 2026
$14.9M
NCATS NIH HHS KL2 TR002379
6 · The paper itself

Abstract

The Nostoc sp. strain CCCryo 231-06 is a cyanobacterial strain capable of surviving under extreme conditions and thus is of great interest for the astrobiology community. The knowledge of its complete genome sequence would serve as a guide for further studies. However, a major concern has been placed on the effects of contamination on the quality of sequencing data without a reference genome. Here, we report the use of microfluidic technology combined with single cell sequencing and

Indexed as

AstrobiologyMicrobial genomicsMicrobiologySpace sciences

Identifiers

PMID35573199
PMCPMC9095746

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.