Evidence map›Paper›PMID 35569121›Full record

ArticleBiotechnology journal2022

An efficient cell-free protein synthesis platform for producing proteins with pyrrolysine-based noncanonical amino acids.

Arnaz Ranji Charna, Benjamin J Des Soye, Ioanni Ntai, Neil L Kelleher, Michael C Jewett

Open access · greenAbstract read
In one paragraph

Article in Biotechnology journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Bottom-Up Synthetic Biology Using Cell-Free Protein Synthesis.Advances in biochemical engineering/biotechnology · 2023
    Review
  7. Advancing synthetic biology through cell-free protein synthesis.Computational and structural biotechnology journal · 2023
    Review
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Arnaz Ranji CharnaDepartment of Chemical and Biological Engineering, Northwestern University, Evanston, Illinois, USA.
Benjamin J Des SoyeDepartment of Chemical and Biological Engineering, Northwestern University, Evanston, Illinois, USA.
Ioanni NtaiChemistry of Life Processes Institute, Northwestern University, Evanston, Illinois, USA.
Neil L KelleherChemistry of Life Processes Institute, Northwestern University, Evanston, Illinois, USA.
Michael C JewettDepartment of Chemical and Biological Engineering, Northwestern University, Evanston, Illinois, USA.
Northwestern University · US

Funding

TR&D 7: Cell Specific ProteomicsP41GM108569 · NIGMS · NORTHWESTERN UNIVERSITY · PI KELLEHER, NEIL L · 2015 to 2024
$13.6M
NIGMS NIH HHS P41 GM108569
6 · The paper itself

Abstract

Incorporation of noncanonical amino acids (ncAAs) into proteins opens new opportunities in biotechnology and synthetic biology. Pyrrolysine (Pyl)-based ncAAs are some of the most predominantly used, but expression systems suffer from low yields. Here, we report a highly efficient cell-free protein synthesis (CFPS) platform for site-specific incorporation of Pyl-based ncAAs into proteins using amber suppression. This platform is based on cellular extracts derived from genomically recoded Escherichia coli lacking release factor 1 and enhanced through deletion of endonuclease A. To enable ncAA incorporation, orthogonal translation system (OTS) components (i.e., the orthogonal transfer RNA [tRNA] and orthogonal aminoacyl tRNA synthetase) were coexpressed in the source strain prior to lysis and the orthogonal tRNA

Indexed as

Amino Acids, BasicEscherichia coliAmino AcidsGreen Fluorescent ProteinsLysineProtein BiosynthesisRNA, TransferAmino AcidsAmino Acids, BasicGreen Fluorescent ProteinsLysinepyrrolysineRNA, Transfercell-free protein synthesischemical biologygenetic code expansionin vitro transcription and translationnoncanonical amino acidssynthetic biology

Identifiers

PMID35569121
PMCPMC9452482
OpenAlexW4280523952

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.