Evidence map›Paper›PMID 35568200›Full record

ArticleThe Journal of biological chemistry2022

Giardia intestinalis thymidine kinase is a high-affinity enzyme crucial for DNA synthesis and an exploitable target for drug discovery.

Sascha Krakovka, Farahnaz Ranjbarian, Lucas A Luján, Alicia Saura, Nicolai B Larsen, Alejandro Jiménez-González, Anna Reggenti, Hugo D Luján, Staffan G Svärd, Anders Hofer

Open access · goldAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.6field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Ultrastructural Alterations of the Human PathogenPathogens (Basel, Switzerland) · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Sascha KrakovkaDepartment of Cell and Molecular Biology, BMC, Uppsala University, Uppsala, Sweden.
Farahnaz RanjbarianDepartment of Medical Biochemistry and Biophysics, Umeå University, Umeå, Sweden.
Lucas A LujánCentro de Investigación y Desarrollo en Immunología y Enfermedades Infecciosas (CIDIE), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)/Universidad Católica de Córdoba (UCC), Cordoba, Argentina.
Alicia SauraCentro de Investigación y Desarrollo en Immunología y Enfermedades Infecciosas (CIDIE), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)/Universidad Católica de Córdoba (UCC), Cordoba, Argentina.
Nicolai B LarsenStatens Serum Institut, København S, Denmark.
Alejandro Jiménez-GonzálezDepartment of Cell and Molecular Biology, BMC, Uppsala University, Uppsala, Sweden.
Anna ReggentiDepartment of Medical Biochemistry and Biophysics, Umeå University, Umeå, Sweden.
Hugo D LujánCentro de Investigación y Desarrollo en Immunología y Enfermedades Infecciosas (CIDIE), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)/Universidad Católica de Córdoba (UCC), Cordoba, Argentina.
Staffan G SvärdDepartment of Cell and Molecular Biology, BMC, Uppsala University, Uppsala, Sweden. Electronic address: staffan.svard@icm.uu.se.
Anders HoferDepartment of Medical Biochemistry and Biophysics, Umeå University, Umeå, Sweden. Electronic address: anders.hofer@umu.se.
Umeå University · SEUniversidad Católica de Córdoba · ARUppsala University · SEStatens Serum Institut · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Giardiasis is a diarrheal disease caused by the unicellular parasite Giardia intestinalis, for which metronidazole is the main treatment option. The parasite is dependent on exogenous deoxyribonucleosides for DNA replication and thus is also potentially vulnerable to deoxyribonucleoside analogs. Here, we characterized the G. intestinalis thymidine kinase, a divergent member of the thymidine kinase 1 family that consists of two weakly homologous parts within one polypeptide. We found that the recombinantly expressed enzyme is monomeric, with 100-fold higher catalytic efficiency for thymidine compared to its second-best substrate, deoxyuridine, and is furthermore subject to feedback inhibition by dTTP. This efficient substrate discrimination is in line with the lack of thymidylate synthase and dUTPase in the parasite, which makes deoxy-UMP a dead-end product that is potentially harmful if converted to deoxy-UTP. We also found that the antiretroviral drug azidothymidine (AZT) was an equally good substrate as thymidine and was active against WT as well as metronidazole-resistant G. intestinalis trophozoites. This drug inhibited DNA synthesis in the parasite and efficiently decreased cyst production in vitro, which suggests that it could reduce infectivity. AZT also showed a good effect in G. intestinalis-infected gerbils, reducing both the number of trophozoites in the small intestine and the number of viable cysts in the stool. Taken together, these results suggest that the absolute dependency of the parasite on thymidine kinase for its DNA synthesis can be exploited by AZT, which has promise as a future medication effective against metronidazole-refractory giardiasis.

Indexed as

DNA ReplicationGiardia lambliaProtozoan ProteinsThymidine KinaseZidovudineAnimalsDrug DiscoveryGerbillinaeGiardiasisMetronidazoleThymidineMetronidazoleProtozoan ProteinsThymidineThymidine KinaseZidovudineazidothymidinedeoxynucleoside kinasedeoxynucleoside salvagedeoxyribonucleoside kinasedeoxyribonucleoside salvageGiardia duodenumGiardia intestinalisGiardia lambliathymidine kinasezidovudine

Identifiers

PMID35568200
PMCPMC9190010
OpenAlexW4280566460

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.