Evidence map›Paper›PMID 35568033›Full record

ArticleCell2022

Host and pathogen response to bacteriophage engineered against Mycobacterium abscessus lung infection.

Jerry A Nick, Rebekah M Dedrick, Alice L Gray, Eszter K Vladar, Bailey E Smith, Krista G Freeman, Kenneth C Malcolm, L Elaine Epperson, Nabeeh A Hasan, Jo Hendrix and 20 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 153 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
153citing papers in PubMed, 1 pooled it
37.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

153 citing papers in PubMed, 1 synthesis or guideline pooled it, 239 citations in OpenAlex.

  1. Guideline
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  12. Journal of bacteriology · 2026
    Review
  13. Smooth-to-rough morphotype switching, a mechanism of phage resistance inProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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  15. Article
  16. Article
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  19. Review
  20. Genome Sequence of Mycobacteriophage Lilbit.microPublication biology · 2026
    Article

93 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

30 authors at 5 institutions in 1 country.

Jerry A NickDepartment of Medicine, National Jewish Health, Denver, CO 80206, USA; Department of Medicine, University of Colorado School of Medicine, Aurora, CO 80045, USA. Electronic address: nickj@njhealth.org.
Rebekah M DedrickDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, PA 15260, USA.
Alice L GrayDepartment of Medicine, University of Colorado School of Medicine, Aurora, CO 80045, USA.
Eszter K VladarDepartment of Medicine, University of Colorado School of Medicine, Aurora, CO 80045, USA.
Bailey E SmithDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, PA 15260, USA.
Krista G FreemanDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, PA 15260, USA.
Kenneth C MalcolmDepartment of Medicine, National Jewish Health, Denver, CO 80206, USA.
L Elaine EppersonCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206, USA.
Nabeeh A HasanCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206, USA.
Jo HendrixCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206, USA; Computational Bioscience Program, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, USA.
Kimberly CallahanCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206, USA.
Kendra WaltonCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206, USA.
Brian VestalCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206, USA.
Emily WheelerDepartment of Medicine, National Jewish Health, Denver, CO 80206, USA.
Noel M RysavyDepartment of Medicine, National Jewish Health, Denver, CO 80206, USA.
Katie PochDepartment of Medicine, National Jewish Health, Denver, CO 80206, USA.
Silvia CaceresDepartment of Medicine, National Jewish Health, Denver, CO 80206, USA.
Valerie K LovellDepartment of Medicine, National Jewish Health, Denver, CO 80206, USA.
Katherine B HisertDepartment of Medicine, National Jewish Health, Denver, CO 80206, USA; Department of Medicine, University of Colorado School of Medicine, Aurora, CO 80045, USA.
Vinicius Calado de MouraDepartment of Medicine, National Jewish Health, Denver, CO 80206, USA.
Delphi ChatterjeeMycobacteria Research Laboratories, Department of Microbiology, Immunology and Pathology, Colorado State University, 1682 Campus Delivery, Fort Collins, CO 80523, USA.
Prithwiraj DeMycobacteria Research Laboratories, Department of Microbiology, Immunology and Pathology, Colorado State University, 1682 Campus Delivery, Fort Collins, CO 80523, USA.
Natalia WeaklyCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206, USA.
Stacey L MartinianoDepartment of Pediatrics, Children's Hospital Colorado, University of Colorado School of Medicine, Aurora, CO 80045, USA.
David A LynchDepartment of Radiology, National Jewish Health, Denver, CO 80206, USA.
Charles L DaleyDepartment of Medicine, National Jewish Health, Denver, CO 80206, USA; Department of Medicine, University of Colorado School of Medicine, Aurora, CO 80045, USA.
Michael StrongCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206, USA.
Fan JiaCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206, USA.
Graham F HatfullDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, PA 15260, USA. Electronic address: gfh@pitt.edu.
Rebecca M DavidsonCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206, USA.
National Jewish Health · USUniversity of Pittsburgh · USColorado State University · USUniversity of Colorado Denver · USChildren's Hospital Colorado · US

Funding

Computational Bioscience Program Training GrantT15LM009451 · NLM · UNIVERSITY OF COLORADO DENVER · PI Katherina Kechris-Mays, Arjun Krishnan · 2007 to 2026
$11.7M
Bacteriophage diversity, dynamics, function, and exploitationR35GM131729 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Graham F. Hatfull · 2019 to 2026
$3.6M
Viral-induced Adaptation of Neutrophil Response in ARDSR01HL090991 · NHLBI · NATIONAL JEWISH HEALTH · PI NICK, JERRY A · 2007 to 2010
$1.7M
Prospective Longitudinal Assessment of Culture-Independent Molecular Airway Markers of Nontuberculous MycobacteriaR01HL146228 · NHLBI · NATIONAL JEWISH HEALTH · PI HILL, JANE, NICK, JERRY A · 2019 to 2022
$1.7M
Genetic Epidemiology of Nontuberculous Mycobacteria for Predicting Host Specificity and Lung Disease OutcomesK01AI125726 · NIAID · NATIONAL JEWISH HEALTH · PI DAVIDSON, REBECCA · 2016 to 2020
$557k
Howard Hughes Medical Institute GT12053NHLBI NIH HHS R01 HL090991NHLBI NIH HHS R01 HL146228NIAID NIH HHS K01 AI125726NIGMS NIH HHS R35 GM131729NLM NIH HHS T15 LM009451
6 · The paper itself

Abstract

Two mycobacteriophages were administered intravenously to a male with treatment-refractory Mycobacterium abscessus pulmonary infection and severe cystic fibrosis lung disease. The phages were engineered to enhance their capacity to lyse M. abscessus and were selected specifically as the most effective against the subject's bacterial isolate. In the setting of compassionate use, the evidence of phage-induced lysis was observed using molecular and metabolic assays combined with clinical assessments. M. abscessus isolates pre and post-phage treatment demonstrated genetic stability, with a general decline in diversity and no increased resistance to phage or antibiotics. The anti-phage neutralizing antibody titers to one phage increased with time but did not prevent clinical improvement throughout the course of treatment. The subject received lung transplantation on day 379, and systematic culturing of the explanted lung did not detect M. abscessus. This study describes the course and associated markers of a successful phage treatment of M. abscessus in advanced lung disease.

Indexed as

BacteriophagesCystic FibrosisMycobacterium abscessusMycobacterium Infections, NontuberculousAnti-Bacterial AgentsHumansLungMaleAnti-Bacterial AgentsbacteriophagesCFTR modulator therapycystic fibrosisimmunoglobulinlipoarabinomannanlung transplantMycobacterium abscessusMycobacterium aviumnontuberculous mycobacterial lung diseaseNTM

Identifiers

PMID35568033
PMCPMC9840467
OpenAlexW4280519382

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.