Evidence map›Paper›PMID 35567668›Full record

ArticleVirus genes2022

Molecular characteristics and pathogenicity of an equid alphaherpesvirus 1 strain isolated in China.

Yue Hu, Qinrui Jia, Jianhua Liu, Wencheng Sun, Zilei Bao, Chuanzhong Che, Guiling Wu, Bin Fan, Jarhen, Duoliang Ran

Abstract read
PubMed Publisher
In one paragraph

Article in Virus genes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Updated ACVIM consensus statement on equine herpesvirus-1.Journal of veterinary internal medicine
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yue HuCollege of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, Xinjiang, China.
Qinrui JiaCollege of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, Xinjiang, China.
Jianhua LiuCollege of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, Xinjiang, China.
Wencheng SunCollege of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, Xinjiang, China.
Zilei BaoCollege of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, Xinjiang, China.
Chuanzhong CheCollege of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, Xinjiang, China.
Guiling WuCollege of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, Xinjiang, China.
Bin FanCollege of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, Xinjiang, China.
JarhenCollege of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, Xinjiang, China.
Duoliang RanCollege of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, Xinjiang, China. r13095035829@163.com.ORCID http://orcid.org/0000-0002-1291-0189

Funding

The Major Scientific and Technological Special Project of Xinjiang Uygur Autonomous Region 2017A01002-2-4
6 · The paper itself

Abstract

Equid alphaherpesvirus 1 (EHV-1) is prevalent in China, and causes notable economic damage to the equine industry. However, there is no information regarding the molecular characteristics and pathogenicity of the Chinese strains. Therefore, an EHV-1 strain, named YM2019, was isolated from the lung tissue of an aborted horse fetus in Xinjiang, China, and its genome and pathogenicity were analyzed. The full genome of the isolate was 150,267 base pairs in length, with 56.7% G + C content. Genetic and phylogenetic analysis showed that strain YM2019 (GenBank: MT063054) belonged to the ORF30 N752 genotype but displayed a high level of similarity with strain Ab4 (ORF30 D752, GenBank: AY665713) isolated in Britain. Fourteen unique amino acid mutations were found when comparing strain YM2019 with the reference strains Ab4 and V592 (ORF30 N752, GenBank: AY464052). Syrian hamsters infected with strain YM2019 exhibited severe respiratory and neurological clinical signs and died. Infection with strain YM2019 in Yili horses caused rhinopneumonitis, viremia, and neurological clinical signs such as hind limb lameness, prostration, and reduced movement. Here, we describe the features of an EHV-1 strain discovered in China, together with the complete genome sequence, and reveal that a nonneurovirulent strain (ORF30 N752) can also cause neurological signs in horses. The data will be useful in providing some reference for further research into the relationship between viral genotypes and pathogenicity.

Indexed as

Herpesviridae InfectionsHerpesvirus 1, EquidHorse DiseasesAnimalsHorsesOpen Reading FramesPhylogenyVirulenceEquid alphaherpesvirus 1GenotypePathogenicityPhylogenetic analysisWhole genome sequence

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.