Evidence map›Paper›PMID 35567389›Full record

ArticleCancer medicine2022

Novel protein contact points among TP53 and minichromosome maintenance complex proteins 2, 3, and 5.

Stephanie Schaefer-Ramadan, Jovana Aleksic, Nayra M Al-Thani, Joel A Malek

Open access · goldAbstract read
In one paragraph

Article in Cancer medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Stephanie Schaefer-RamadanDepartment of Genetic Medicine, Weill Cornell Medicine in Qatar, Doha, Qatar.ORCID 0000-0001-9650-1472
Jovana AleksicDepartment of Genetic Medicine, Weill Cornell Medicine in Qatar, Doha, Qatar.ORCID 0000-0002-3366-8379
Nayra M Al-ThaniDepartment of Genetic Medicine, Weill Cornell Medicine in Qatar, Doha, Qatar.ORCID 0000-0001-8717-0309
Joel A MalekDepartment of Genetic Medicine, Weill Cornell Medicine in Qatar, Doha, Qatar.ORCID 0000-0002-1516-8477
Weill Cornell Medical College in Qatar · QA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveIdentify protein contact points between TP53 and minichromosome maintenance (MCM) complex proteins 2, 3, and 5 with high resolution allowing for potential novel Cancer drug design.

methodsA next-generation sequencing-based protein-protein interaction method developed in our laboratory called AVA-Seq was applied to a gold-standard human protein interaction set. Proteins including TP53, MCM2, MCM3, MCM5, HSP90AA1, PCNA, NOD1, and others were sheared and ligated into the AVA-Seq system. Protein-protein interactions were then identified in both mild and stringent selective conditions.

resultsKnown interactions among MCM2, MCM3, and MCM5 were identified with the AVA-Seq system. The interacting regions detected between these three proteins overlap with the structural data of the MCM complex, and novel domains were identified with high resolution determined by multiple overlapping fragments. Fragments of wild type TP53 were shown to interact with MCM2, MCM3, and MCM5, and details on the location of the interactions were provided. Finally, a mini-network of known and novel cancer protein interactions was provided, which could have implications for fundamental changes in multiple cancers.

conclusionWe provide a high-resolution mini-interactome that could direct novel drug targets and implicate possible effects of specific cancer mutations.

Indexed as

Minichromosome Maintenance ProteinsTumor Suppressor Protein p53DNA-Binding ProteinsDrug DesignHumansNeoplasmsDNA-Binding ProteinsMinichromosome Maintenance ProteinsTP53 protein, humanTumor Suppressor Protein p53cancerDNA helicaseDNA replicationprotein interactionstherapeutic targetsTP53

Identifiers

PMID35567389
PMCPMC9761056
OpenAlexW4280587080

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.