Evidence map›Paper›PMID 35565297›Full record

ArticleCancers2022

Combining TMEM Doorway Score and Mena

Xianjun Ye, Maja H Oktay, Xiaonan Xue, Thomas E Rohan, Paula S Ginter, Timothy D'Alfonso, Elizabeth N Kornaga, Don G Morris, David Entenberg, John S Condeelis

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 56% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Xianjun YeDepartment of Anatomy and Structural Biology, Albert Einstein College of Medicine/Montefiore Medical Center, Bronx, NY 10461, USA.ORCID 0000-0002-1136-4040
Maja H OktayDepartment of Anatomy and Structural Biology, Albert Einstein College of Medicine/Montefiore Medical Center, Bronx, NY 10461, USA.
Xiaonan XueDepartment of Epidemiology and Population Health, Albert Einstein College of Medicine/Montefiore Medical Center, Bronx, NY 10461, USA.
Thomas E RohanDepartment of Epidemiology and Population Health, Albert Einstein College of Medicine/Montefiore Medical Center, Bronx, NY 10461, USA.
Paula S GinterDepartment of Pathology, NYU Langone Hospital-Long Island, Mineola, NY 11501, USA.ORCID 0000-0002-5107-5411
Timothy D'AlfonsoDepartment of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY 10021, USA.
Elizabeth N KornagaTranslational Laboratories, Tom Baker Cancer Centre, Calgary, AB T2N 4N2, Canada.
Don G MorrisTranslational Laboratories, Tom Baker Cancer Centre, Calgary, AB T2N 4N2, Canada.
David EntenbergDepartment of Anatomy and Structural Biology, Albert Einstein College of Medicine/Montefiore Medical Center, Bronx, NY 10461, USA.ORCID 0000-0003-0422-7264
John S CondeelisDepartment of Anatomy and Structural Biology, Albert Einstein College of Medicine/Montefiore Medical Center, Bronx, NY 10461, USA.
Albert Einstein College of Medicine · USUniversity of Calgary · CAIsland Hospital · USMemorial Sloan Kettering Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI THOMAS E ROHAN · 1985 to 2026
$111.2M
CTSA Administrative Supplement for Informatics Core: A novel AI/ML system to predict respiratory failure and ARDS in Covid-19 patientsUL1TR002556 · NCATS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI KELLER, MARLA J, KIM, MIMI Y · 2018 to 2022
$26.7M
TMEM, MENAcalc, and MENAINV as Prognostic and Predictive Markers for Breast Cancer MetastasisR01CA240646 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI CONDEELIS, JOHN S, ROHAN, THOMAS E · 2020 to 2024
$4.1M
(7) Novel imaging devices for measurement and control of tumor microenvironmentsR01CA216248 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI CADY, NATHANIEL CHARLES, CONDEELIS, JOHN S · 2017 to 2021
$2.9M
High-speed/resolution whole slide scanner supported by two core facilitiesS10OD019961 · OD · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI CONDEELIS, JOHN S · 2015 to 2015
$326k
NCATS NIH HHS UL1 TR002556NCI NIH HHS CA013330NCI NIH HHS P30 CA008748NCI NIH HHS P30 CA013330NCI NIH HHS R01 CA216248NCI NIH HHS R01 CA240646NIH HHS CA216248NIH HHS CA240646NIH HHS OD019961NIH HHS S10 OD019961
6 · The paper itself

Abstract

purposeto develop several digital pathology-based machine vision algorithms for combining TMEM and Mena

methodsThis retrospective study included a subset of 130 patients (65 patients with no recurrence and 65 patients with a recurrence at 5 years) from the Calgary Tamoxifen cohort of breast cancer patients. Patients had confirmed invasive breast cancer and received adjuvant tamoxifen therapy. Of the 130 patients, 86 cases were suitable for analysis in this study. Sequential sections of formalin-fixed paraffin-embedded patient samples were stained for TMEM doorways (immunohistochemistry triple staining) and Mena

resultsthe best performing combined marker gave an RMST difference of 5.27 years (95% CI: 1.71-8.37), compared to 3.56 years (95% CI: 0.95-6.1) for the associated standalone TMEM doorway analysis and 2.94 years (95% CI: 0.25-5.87) for the associated standalone Mena

conclusionscombining TMEM doorway and Mena

Indexed as

combined markerMenaCalcmetastasisprognosticRMST differenceTMEM doorway

Identifiers

PMID35565297
PMCPMC9101795
OpenAlexW4225007712

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.