Evidence map›Paper›PMID 35565277›Full record

ArticleCancers2022

Spatial Characterization of Tumor-Infiltrating Lymphocytes and Breast Cancer Progression.

Danielle J Fassler, Luke A Torre-Healy, Rajarsi Gupta, Alina M Hamilton, Soma Kobayashi, Sarah C Van Alsten, Yuwei Zhang, Tahsin Kurc, Richard A Moffitt, Melissa A Troester and 2 more

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed, 1 pooled it
5.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 1 synthesis or guideline pooled it, 54 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Cross-modal fusion of cytomorphology andFrontiers in immunology · 2026
    Article
  8. Article
  9. Review
  10. Article
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  14. Article
  15. Review
  16. Article
  17. Article
  18. Spatial proximity of CD8NPJ breast cancer · 2025
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Danielle J FasslerDepartment of Biomedical Informatics, Stony Brook University, Stony Brook, NY 11790, USA.ORCID 0000-0002-3715-7699
Luke A Torre-HealyDepartment of Biomedical Informatics, Stony Brook University, Stony Brook, NY 11790, USA.ORCID 0000-0002-9513-4620
Rajarsi GuptaDepartment of Biomedical Informatics, Stony Brook University, Stony Brook, NY 11790, USA.ORCID 0000-0002-1577-8718
Alina M HamiltonDepartment of Pathology and Laboratory Medicine, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.ORCID 0000-0001-9121-7114
Soma KobayashiDepartment of Biomedical Informatics, Stony Brook University, Stony Brook, NY 11790, USA.
Sarah C Van AlstenDepartment of Pathology and Laboratory Medicine, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
Yuwei ZhangDepartment of Biomedical Informatics, Stony Brook University, Stony Brook, NY 11790, USA.
Tahsin KurcDepartment of Biomedical Informatics, Stony Brook University, Stony Brook, NY 11790, USA.
Richard A MoffittDepartment of Biomedical Informatics, Stony Brook University, Stony Brook, NY 11790, USA.ORCID 0000-0003-2723-5902
Melissa A TroesterDepartment of Pathology and Laboratory Medicine, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
Katherine A HoadleyDepartment of Genetics, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.ORCID 0000-0002-1216-477X
Joel SaltzDepartment of Biomedical Informatics, Stony Brook University, Stony Brook, NY 11790, USA.
Stony Brook University · USUniversity of North Carolina at Chapel Hill · US

Funding

Virology Research Program (Program 4)P30CA016086 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI David Darr · 1985 to 2026
$201.5M
Tissue Procurement & PathologyP50CA058223 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CHARLES M PEROU · 1992 to 2026
$59.3M
UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Stephanie Engel · 2001 to 2026
$36.3M
Reproduction, Lactation and Hormonal Factors in Breast Cancer SubtypesP01CA151135 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI AMBROSONE, CHRISTINE B., OLSHAN, ANDREW · 2011 to 2017
$18.1M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM008444 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI FROHMAN, MICHAEL A. · 1992 to 2024
$12.6M
TCIA Sustainment and Scalability - Platforms for Quantitative Imaging Informatics in Precision MedicineU24CA215109 · NCI · UNIV OF ARKANSAS FOR MED SCIS · PI BANERJEE, IMON, PRIOR, FRED WILLIAM · 2017 to 2021
$8.5M
Methods and Tools for Integrating Pathomics Data into Cancer RegistriesUH3CA225021 · NCI · STATE UNIVERSITY NEW YORK STONY BROOK · PI CLIFFORD, GARI DAVID, DURBIN, ERIC B. · 2020 to 2022
$1.9M
Impact of the Breast Cancer Immune Microenvironment on Racial Disparities and SurvivorshipF31CA257388 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI HAMILTON, ALINA MARIE · 2021 to 2022
$44k
NCI NIH HHS F31 CA257388NCI NIH HHS NIH/NCI P50-CA58223NCI NIH HHS P01 CA151135NCI NIH HHS P01CA151135NCI NIH HHS P30 CA016086NCI NIH HHS P30CA016086NCI NIH HHS P50 CA058223NCI NIH HHS U24CA215109NCI NIH HHS UH3 CA225021NCI NIH HHS UH3CA225021NIEHS NIH HHS P30 ES010126NIGMS NIH HHS T32 GM008444
6 · The paper itself

Abstract

Tumor-infiltrating lymphocytes (TILs) have been established as a robust prognostic biomarker in breast cancer, with emerging utility in predicting treatment response in the adjuvant and neoadjuvant settings. In this study, the role of TILs in predicting overall survival and progression-free interval was evaluated in two independent cohorts of breast cancer from the Cancer Genome Atlas (TCGA BRCA) and the Carolina Breast Cancer Study (UNC CBCS). We utilized machine learning and computer vision algorithms to characterize TIL infiltrates in digital whole-slide images (WSIs) of breast cancer stained with hematoxylin and eosin (H&E). Multiple parameters were used to characterize the global abundance and spatial features of TIL infiltrates. Univariate and multivariate analyses show that large aggregates of peritumoral and intratumoral TILs (forests) were associated with longer survival, whereas the absence of intratumoral TILs (deserts) is associated with increased risk of recurrence. Patients with two or more high-risk spatial features were associated with significantly shorter progression-free interval (PFI). This study demonstrates the practical utility of Pathomics in evaluating the clinical significance of the abundance and spatial patterns of distribution of TIL infiltrates as important biomarkers in breast cancer.

Indexed as

breast cancercomputational pathologymachine learningrisk of recurrenceTILs

Identifiers

PMID35565277
PMCPMC9105398
OpenAlexW4225009193

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.