Evidence map›Paper›PMID 35565248›Full record

ArticleCancers2022

Potential Role of Inflammation-Promoting Biliary Microbiome in Primary Sclerosing Cholangitis and Cholangiocarcinoma.

Katsuyuki Miyabe, Vinay Chandrasekhara, Nicha Wongjarupong, Jun Chen, Lu Yang, Stephen Johnson, Nicholas Chia, Marina Walther-Antonio, Janet Z Yao, Sean C Harrington and 15 more

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 29 citations in OpenAlex.

  1. Pooled it
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  7. Microbial dysbiosis in cholangiocarcinoma.Frontiers in microbiology · 2026
    Review
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  10. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 3 institutions in 2 countries.

Katsuyuki MiyabeDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
Vinay ChandrasekharaDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
Nicha WongjarupongDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
Jun ChenDivision of Computational Biology, Mayo Clinic, Rochester, MN 55905, USA.
Lu YangDivision of Computational Biology, Mayo Clinic, Rochester, MN 55905, USA.
Stephen JohnsonDivision of Computational Biology, Mayo Clinic, Rochester, MN 55905, USA.
Nicholas ChiaDivision of Computational Biology, Mayo Clinic, Rochester, MN 55905, USA.
Marina Walther-AntonioMicrobiome Program, Center for Individualized Medicine, Mayo Clinic, Rochester, MN 55905, USA.
Janet Z YaoMicrobiome Program, Center for Individualized Medicine, Mayo Clinic, Rochester, MN 55905, USA.
Sean C HarringtonMicrobiome Program, Center for Individualized Medicine, Mayo Clinic, Rochester, MN 55905, USA.
Cynthia K NordykeDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
John E EatonDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
Andrea A GossardDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
Sharad OliDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
Hamdi A AliDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
Sravanthi LavuDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
Nasra H GiamaDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
Fatima A HassanDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
Hawa M AliDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
Felicity T EndersDivision of Computational Biology, Mayo Clinic, Rochester, MN 55905, USA.
Sumera I IlyasDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
Gregory J GoresDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0003-3151-009X
Mark D TopazianDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
Purna C KashyapDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.
Lewis R RobertsDivision of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0001-7885-8574
Mayo Clinic in Arizona · USMayo Clinic · USWestchester Medical Center · US

Funding

Mayo Clinic Center for Clinical and Translational Science (CCaTS UL1 Supplement - Dr. Timothy Curry)UL1TR002377 · NCATS · MAYO CLINIC ROCHESTER · PI VESNA D GAROVIC · 2017 to 2026
$78.4M
PILOT AND FEASIBILTY PROGRAMP30DK084567 · NIDDK · MAYO CLINIC ROCHESTER · PI Nicholas F. LaRusso · 2009 to 2026
$22.2M
Project 4: ImmunovirotherapyP50CA210964 · NCI · MAYO CLINIC ROCHESTER · PI Zongming Eric Chen · 2018 to 2026
$20.5M
NCI NIH HHS P50CA210964NIDDK NIH HHS P30 DK084567NIH HHS P30DK084567NIH HHS UL1TR002377
6 · The paper itself

Abstract

backgroundPrimary sclerosing cholangitis (PSC) is a major risk factor for cholangiocarcinoma (CCA). We investigated biliary and fecal microbiota to determine whether specific microbes in the bile or stool are associated with PSC or CCA.

methodsBile was obtained from 32 patients with PSC, 23 with CCA with PSC, 26 with CCA without PSC, and 17 controls. Over 90% of bile samples were from patients with perihilar CCA. Stool was obtained from 31 patients with PSC (11 were matched to bile), 16 with CCA with PSC (10 matched to bile), and 11 with CCA without PSC (6 matched to bile). Microbiota composition was assessed using 16SrRNA-marker-based sequencing and was compared between groups.

resultsBile has a unique microbiota distinguished from negative DNA controls and stool. Increased species richness and abundance of Fusobacteria correlated with duration of PSC and characterized the biliary microbiota in CCA. Stool microbiota composition showed no significant differences between groups.

conclusionsWe identified a unique microbial signature in the bile of patients with increased duration of PSC or with CCA, suggesting a role for microbiota-driven inflammation in the pathogenesis and or progression to perihilar CCA. Further studies are needed to test this hypothesis.

Indexed as

bile microbiomecholangiocarcinomaprimary sclerosing cholangitis

Identifiers

PMID35565248
PMCPMC9104786
OpenAlexW4224326445

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.