Evidence map›Paper›PMID 35565197›Full record

ArticleCancers2022

Efficient Small Extracellular Vesicles (EV) Isolation Method and Evaluation of EV-Associated DNA Role in Cell-Cell Communication in Cancer.

Venkatesh Kumar Chetty, Jamal Ghanam, Srishti Anchan, Katarina Reinhardt, Alexandra Brenzel, Márton Gelléri, Christoph Cremer, Elena Grueso-Navarro, Markus Schneider, Nils von Neuhoff and 4 more

Abstract read
In one paragraph

Article in Cancers, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Biogenesis and functional implications of extracellular vesicles in cancer metastasis.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2025
    Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Venkatesh Kumar ChettyDepartment of Pediatrics III, University Hospital Essen, 45147 Essen, Germany.
Jamal GhanamDepartment of Pediatrics III, University Hospital Essen, 45147 Essen, Germany.
Srishti AnchanDepartment of Pediatrics III, University Hospital Essen, 45147 Essen, Germany.
Katarina ReinhardtDepartment of Pediatrics III, University Hospital Essen, 45147 Essen, Germany.
Alexandra BrenzelImaging Center Essen (IMCES), University Hospital Essen, 45147 Essen, Germany.
Márton GellériInstitute of Molecular Biology (IMB), 55128 Mainz, Germany.ORCID 0000-0003-2145-838X
Christoph CremerInstitute of Molecular Biology (IMB), 55128 Mainz, Germany.
Elena Grueso-NavarroInstitute for Infection Prevention and Hospital Epidemiology, Medical Center-University of Freiburg, Faculty of Medicine, 79106 Freiburg, Germany.ORCID 0000-0002-5384-9978
Markus SchneiderDepartment of Pediatrics III, University Hospital Essen, 45147 Essen, Germany.
Nils von NeuhoffDepartment of Pediatrics III, University Hospital Essen, 45147 Essen, Germany.ORCID 0000-0003-4138-5341
Dirk ReinhardtDepartment of Pediatrics III, University Hospital Essen, 45147 Essen, Germany.ORCID 0000-0002-7027-4483
Jadwiga JablonskaDepartment of Otorhinolaryngology, University Hospital Essen, 45147 Essen, Germany.ORCID 0000-0003-1490-2542
Irina NazarenkoInstitute for Infection Prevention and Hospital Epidemiology, Medical Center-University of Freiburg, Faculty of Medicine, 79106 Freiburg, Germany.ORCID 0000-0002-2633-1161
Basant Kumar ThakurDepartment of Pediatrics III, University Hospital Essen, 45147 Essen, Germany.

Funding

Deutsche Forschungsgemeinschaft TH2012/1-1Deutsche Kinderkrebsstiftung 2018.17
6 · The paper itself

Abstract

Small extracellular vesicles (sEVs) play essential roles in intercellular signaling both in normal and pathophysiological conditions. Comprehensive studies of dsDNA associated with sEVs are hampered by a lack of methods, allowing efficient separation of sEVs from free-circulating DNA and apoptotic bodies. In this work, using controlled culture conditions, we enriched the reproducible separation of sEVs from free-circulated components by combining tangential flow filtration, size-exclusion chromatography, and ultrafiltration (TSU). EV-enriched fractions (F2 and F3) obtained using TSU also contained more dsDNA derived from the host genome and mitochondria, predominantly localized inside the vesicles. Three-dimensional reconstruction of high-resolution imaging showed that the recipient cell membrane barrier restricts a portion of EV-DNA. Simultaneously, the remaining EV-DNA overcomes it and enters the cytoplasm and nucleus. In the cytoplasm, EV-DNA associates with dsDNA-inflammatory sensors (cGAS/STING) and endosomal proteins (Rab5/Rab7). Relevant to cancer, we found that EV-DNA isolated from leukemia cell lines communicates with mesenchymal stromal cells (MSCs), a critical component in the BM microenvironment. Furthermore, we illustrated the arrangement of sEVs and EV-DNA at a single vesicle level using super-resolution microscopy. Altogether, employing TSU isolation, we demonstrated EV-DNA distribution and a tool to evaluate the exact EV-DNA role of cell-cell communication in cancer.

Indexed as

cell-free DNAEV characterizationEV communicationEV-DNAEV in cancerEV isolationexosomesextracellular dsDNApure EVssmall extracellular vesicles

Identifiers

PMID35565197
PMCPMC9099953

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.