Evidence map›Paper›PMID 35565192›Full record

ArticleCancers2022

Machine-Learning-Based Clinical Biomarker Using Cell-Free DNA for Hepatocellular Carcinoma (HCC).

Taehee Lee, Piper A Rawding, Jiyoon Bu, Sunghee Hyun, Woosun Rou, Hongjae Jeon, Seokhyun Kim, Byungseok Lee, Luke J Kubiatowicz, Dawon Kim and 2 more

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Taehee LeeDepartment of Biomedical Laboratory Science, Daegu Health College, Daegu 41453, Korea.ORCID 0000-0002-1975-2961
Piper A RawdingPharmaceutical Sciences Division, School of Pharmacy, University of Wisconsin-Madison, Madison, WI 53705, USA.
Jiyoon BuPharmaceutical Sciences Division, School of Pharmacy, University of Wisconsin-Madison, Madison, WI 53705, USA.
Sunghee HyunDepartment of Senior Healthcare, Graduate School, Eulji University, Uijeongbu-si 11759, Korea.ORCID 0000-0002-8980-1036
Woosun RouDepartment of Internal Medicine, Chungnam National University Sejong Hospital (CNUSH), Sejong 30099, Korea.ORCID 0000-0003-1619-2660
Hongjae JeonDepartment of Internal Medicine, Chungnam National University Sejong Hospital (CNUSH), Sejong 30099, Korea.
Seokhyun KimDepartment of Internal Medicine, Chungnam National University Hospital, Daejeon 35015, Korea.
Byungseok LeeDepartment of Internal Medicine, Chungnam National University Hospital, Daejeon 35015, Korea.
Luke J KubiatowiczPharmaceutical Sciences Division, School of Pharmacy, University of Wisconsin-Madison, Madison, WI 53705, USA.ORCID 0000-0002-1847-0129
Dawon KimPharmaceutical Sciences Division, School of Pharmacy, University of Wisconsin-Madison, Madison, WI 53705, USA.
Seungpyo HongPharmaceutical Sciences Division, School of Pharmacy, University of Wisconsin-Madison, Madison, WI 53705, USA.ORCID 0000-0001-9870-031X
Hyuksoo EunDepartment of Internal Medicine, Chungnam National University Hospital, Daejeon 35015, Korea.ORCID 0000-0003-0485-0072
University of Wisconsin–Madison · USChungnam National University · KRChungnam National University Hospital · KRDaegu Health College · KREulji University · KR

Funding

HR20C0025040021 HR20C0025040021National Science Foundation (NSF) DMR-1808251NIAMS/NIH 1R01AR069541NIBIB/NIH 1R21EB022374NRF-2019M3E5D1A02068557 NRF-2019M3E5D1A02068557NRF-2020R1A2C4001856 NRF-2020R1A2C4001856
6 · The paper itself

Abstract

(1) Background: Hepatocellular carcinoma (HCC) is one of the leading causes of cancer-related death worldwide. Although various serum enzymes have been utilized for the diagnosis and prognosis of HCC, the currently available biomarkers lack the sensitivity needed to detect HCC at early stages and accurately predict treatment responses. (2) Methods: We utilized our highly sensitive cell-free DNA (cfDNA) detection system, in combination with a machine learning algorithm, to provide a platform for improved diagnosis and prognosis of HCC. (3) Results: cfDNA, specifically alpha-fetoprotein (AFP) expression in captured cfDNA, demonstrated the highest accuracy for diagnosing malignancies among the serum/plasma biomarkers used in this study, including AFP, aspartate aminotransferase, alanine aminotransferase, albumin, alkaline phosphatase, and bilirubin. The diagnostic/prognostic capability of cfDNA was further improved by establishing a cfDNA score (cfD

Indexed as

cell-free DNA (cfDNA)circulating tumor DNA (ctDNA)hepatocellular carcinoma (HCC)liquid biopsyprincipal component analysis (PCA)

Identifiers

PMID35565192
PMCPMC9103537
OpenAlexW4224246049

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.