Evidence map›Paper›PMID 35563437›Full record

ArticleInternational journal of molecular sciences2022

Transcriptome Profiling Provides New Insights into the Molecular Mechanism Underlying the Sensitivity of Cotton Varieties to Mepiquat Chloride.

Zhijun Wang, Yanjun Li, Qianhao Zhu, Liwen Tian, Feng Liu, Xinyu Zhang, Jie Sun

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Zhijun WangThe Key Laboratory of Oasis Eco-agriculture, Agriculture College, Shihezi University, Beisi Road, Shihezi 832003, China.
Yanjun LiThe Key Laboratory of Oasis Eco-agriculture, Agriculture College, Shihezi University, Beisi Road, Shihezi 832003, China.
Qianhao ZhuCSIRO Agriculture and Food, GPO Box 1700, Canberra 2601, Australia.ORCID 0000-0002-6505-7417
Liwen TianCash Crop Research Institute, Xinjiang Agricultural Academy, Urumqi 830091, China.
Feng LiuThe Key Laboratory of Oasis Eco-agriculture, Agriculture College, Shihezi University, Beisi Road, Shihezi 832003, China.ORCID 0000-0002-4693-8489
Xinyu ZhangThe Key Laboratory of Oasis Eco-agriculture, Agriculture College, Shihezi University, Beisi Road, Shihezi 832003, China.
Jie SunThe Key Laboratory of Oasis Eco-agriculture, Agriculture College, Shihezi University, Beisi Road, Shihezi 832003, China.ORCID 0000-0002-8068-8102
Shihezi University · CNCommonwealth Scientific and Industrial Research Organisation · AUXinjiang Academy of Agricultural Sciences · CN

Funding

International S&T Cooperation Projects of BINGTUAN 2021BC001National Natural Science Foundation of China 31860395
6 · The paper itself

Abstract

Mepiquat chloride (MC) is a plant growth regulator widely used in cotton production to control vegetative overgrowth of cotton plants to achieve ideal plant architecture required for high yielding. Cotton varieties respond differently to MC application, but there is little information about the molecular mechanisms underlying the varietal difference. In this study, comparative transcriptome analysis was conducted by using two Upland cotton varieties with different sensitivity (XLZ74, insensitive; SD1068, sensitive) to MC treatment, aiming to understand the molecular mechanisms responsible for varietal difference of MC sensitivity. RNA-seq data were generated from the two varieties treated with MC or water at three time points, 1, 3 and 6 days post-spray (dps). Genes differentially expressed between the MC and mock treatments of XLZ74 (6252) and SD1068 (6163) were subjected to Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses to compare the enriched GO terms and KEGG pathways between the two varieties. Signal transduction of phytohormones, biosynthesis of gibberellins (GAs) and brassinosteroids (BRs) and profiles of transcription factors (TFs) seemed to be differentially affected by MC in the two varieties. The transcriptomic results were further consolidated with the content changes of phytohormones in young stem. Several GA catabolic genes,

Indexed as

Gene Expression Regulation, PlantPlant Growth RegulatorsGene Expression ProfilingGossypiumPiperidinesTranscriptomemepiquatPiperidinesPlant Growth RegulatorsGossypium hirsutum L.mepiquat chloride (MC)phytohormonesRNA sequencing (RNA-seq)transcription factor

Identifiers

PMID35563437
PMCPMC9105546
OpenAlexW4225289064

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.