Evidence map›Paper›PMID 35562674›Full record

ArticleBMC genomic data2022

High-resolution detection of quantitative trait loci for seven important yield-related traits in wheat (Triticum aestivum L.) using a high-density SLAF-seq genetic map.

Tao Li, Qiao Li, Jinhui Wang, Zhao Yang, Yanyan Tang, Yan Su, Juanyu Zhang, Xvebing Qiu, Xi Pu, Zhifen Pan and 9 more

Abstract read
In one paragraph

Article in BMC genomic data, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

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12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The trial behind it

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3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Tao LiChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Qiao LiChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Jinhui WangChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Zhao YangChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Yanyan TangChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Yan SuChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Juanyu ZhangChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Xvebing QiuChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Xi PuChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Zhifen PanChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Haili ZhangChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Junjun LiangChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Zehou LiuCrop Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, Sichuan, China.
Jun LiCrop Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, Sichuan, China.
Wuyun YanState Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Chengdu, 611130, China.
Maoqun YuChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Hai LongChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Yuming WeiTriticeae Research Institute, Sichuan Agricultural University, Chengdu, 611130, China.
Guangbing DengChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China. denggb@cib.ac.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundYield-related traits including thousand grain weight (TGW), grain number per spike (GNS), grain width (GW), grain length (GL), plant height (PH), spike length (SL), and spikelet number per spike (SNS) are greatly associated with grain yield of wheat (Triticum aestivum L.). To detect quantitative trait loci (QTL) associated with them, 193 recombinant inbred lines derived from two elite winter wheat varieties Chuanmai42 and Chuanmai39 were employed to perform QTL mapping in six/eight environments.

resultsA total of 30 QTLs on chromosomes 1A, 1B, 1D, 2A, 2B, 2D, 3A, 4A, 5A, 5B, 6A, 6D, 7A, 7B and 7D were identified. Among them, six major QTLs QTgw.cib-6A.1, QTgw.cib-6A.2, QGw.cib-6A, QGl.cib-3A, QGl.cib-6A, and QSl.cib-2D explaining 5.96-23.75% of the phenotypic variance were detected in multi-environments and showed strong and stable effects on corresponding traits. Three QTL clusters on chromosomes 2D and 6A containing 10 QTLs were also detected, which showed significant pleiotropic effects on multiple traits. Additionally, three Kompetitive Allele Specific PCR (KASP) markers linked with five of these major QTLs were developed. Candidate genes of QTgw.cib-6A.1/QGl.cib-6A and QGl.cib-3A were analyzed based on the spatiotemporal expression patterns, gene annotation, and orthologous search.

conclusionsSix major QTLs for TGW, GL, GW and SL were detected. Three KASP markers linked with five of these major QTLs were developed. These QTLs and KASP markers will be useful for elucidating the genetic architecture of grain yield and developing new wheat varieties with high and stable yield in wheat.

Indexed as

Quantitative Trait LociTriticumChromosome MappingEdible GrainGenetic LinkagePhenotypeLinkage analysisSpecific-locus amplified fragment (SLAF)WheatYieldYield-related traits

Identifiers

PMID35562674
PMCPMC9107147

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.