Evidence map›Paper›PMID 35562653›Full record

ArticleBMC bioinformatics2022

CFVisual: an interactive desktop platform for drawing gene structure and protein architecture.

Huilong Chen, Xiaoming Song, Qian Shang, Shuyan Feng, Weina Ge

Abstract read
In one paragraph

Article in BMC bioinformatics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
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  6. Genome-Wide Analysis of the Caffeoyl Coenzyme A-O-Methyltransferase (International journal of molecular sciences · 2025
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  7. Identification and Functional Exploration of theInternational journal of molecular sciences · 2025
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  8. Article
  9. International journal of molecular sciences · 2024
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  10. Metabolomic and Transcriptomic Profiles in DiverseJournal of agricultural and food chemistry · 2024
    Article
  11. Article
  12. Article
  13. Comprehensive Analysis ofInternational journal of molecular sciences · 2023
    Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Huilong ChenSchool of Life Science, North China University of Science and Technology, Tangshan, 063210, Hebei, China.
Xiaoming SongSchool of Life Science, North China University of Science and Technology, Tangshan, 063210, Hebei, China.
Qian ShangSchool of Life Science, North China University of Science and Technology, Tangshan, 063210, Hebei, China.
Shuyan FengSchool of Life Science, North China University of Science and Technology, Tangshan, 063210, Hebei, China.
Weina GeSchool of Life Science, North China University of Science and Technology, Tangshan, 063210, Hebei, China. gwn-06@163.com.

Funding

Hebei Provincial College Student Innovation and Entrepreneurship Training ProgramX2021006 X2021006
6 · The paper itself

Abstract

backgroundWhen researchers perform gene family analysis, they often analyze the structural characteristics of the gene, such as the distribution of introns and exons. At the same time, characteristic structural analysis of amino acid sequence is also essential, for example, motif and domain features. Researchers often integrate these analyses into one image to dig out more information, but the tools responsible for this integration are lacking.

resultsHere, we developed a tool (CFVisual) for drawing gene structure and protein architecture. CFVisual can draw the phylogenetic tree, gene structure, and protein architecture in one picture, and has rich interactive capabilities, which can meet the work needs of researchers. Furthermore, it also supports arbitrary stitching of the above analysis images. It has become a useful helper in gene family analysis. The CFVisual package was implemented in Python and is freely available from https://github.com/ChenHuilong1223/CFVisual/ .

conclusionCFVisual has been used by some researchers and cited by some articles. In the future, CFVisual will continue to serve as a good helper for researchers in the study of gene structure and protein architecture.

Indexed as

ProteinsSoftwareAmino Acid SequenceIntronsPhylogenyProteinsCFVisualDomainGene structureMotifPromoter

Identifiers

PMID35562653
PMCPMC9102596

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.