Evidence map›Paper›PMID 35561269›Full record

ArticleJournal of clinical laboratory analysis2022

Identification of immune-related lncRNA panel for predicting immune checkpoint blockade and prognosis in head and neck squamous cell carcinoma.

Qun Li, Zhisen Shen, Yi Shen, Hongxia Deng, Yiming Shen, Jianing Wang, Guowen Zhan, Chongchang Zhou

Open access · goldAbstract read
In one paragraph

Article in Journal of clinical laboratory analysis, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 2 pooled it
0.4field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 2 syntheses or guidelines pooled it, 5 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Qun LiDepartment of Otorhinolaryngology Head and Neck Surgery, Ningbo Medical Center Lihuili Hospital, Ningbo, Zhejiang Province, China.
Zhisen ShenDepartment of Otorhinolaryngology Head and Neck Surgery, Ningbo Medical Center Lihuili Hospital, Ningbo, Zhejiang Province, China.ORCID https://orcid.org/0000-0001-6660-0488
Yi ShenDepartment of Otorhinolaryngology Head and Neck Surgery, Ningbo Medical Center Lihuili Hospital, Ningbo, Zhejiang Province, China.
Hongxia DengDepartment of Otorhinolaryngology Head and Neck Surgery, Ningbo Medical Center Lihuili Hospital, Ningbo, Zhejiang Province, China.ORCID https://orcid.org/0000-0001-6547-8265
Yiming ShenDepartment of Otorhinolaryngology Head and Neck Surgery, Ningbo Medical Center Lihuili Hospital, Ningbo, Zhejiang Province, China.
Jianing WangDepartment of Otorhinolaryngology Head and Neck Surgery, Ningbo Medical Center Lihuili Hospital, Ningbo, Zhejiang Province, China.
Guowen ZhanDepartment of Otorhinolaryngology Head and Neck Surgery, Ningbo Yinzhou Second Hospital, Ningbo, Zhejiang Province, China.
Chongchang ZhouDepartment of Otorhinolaryngology Head and Neck Surgery, Ningbo Medical Center Lihuili Hospital, Ningbo, Zhejiang Province, China.ORCID https://orcid.org/0000-0002-8728-6819
Ningbo Medical Center Lihuili Hospital · CNNingbo No. 2 Hospital · CN

Funding

National Natural Science Foundation of China 81670920Ningbo Huimin Technology Research and Development Project Fund 2015C50026Ningbo Medical and Health Brand Discipline PPXK2018-02Ningbo Natural Science Foundation 202003N4239Ningbo "Technology Innovation 2025" Major Special Project 2018B10013Ningbo "Technology Innovation 2025" Major Special Project 2020Z097Zhejiang Province Medical and Health Research Project 2019ZD018Zhejiang Province Medical and Health Research Project 2020RC107Zhejiang Province Medical and Health Research Project 2021KY307Zhejiang Provincial Natural Science Foundation of China LQ21H130001Zhejiang Provincial Natural Science Foundation of China LY19H160014
6 · The paper itself

Abstract

purposeImmunotherapy is changing head and neck squamous cell carcinoma (HNSCC) treatment pattern. According to the Chinese Society of Clinical Oncology (CSCO) guidelines, immunotherapy has been deemed as first-line recommendation for recurrent/metastatic HNSCC, marking that advanced HNSCC has officially entered the era of immunotherapy. Long non-coding RNAs (lncRNAs) impact every step of cancer immunity. Therefore, reliable immune-lncRNAs able to accurately predict the immune landscape and survival of HNSCC are crucial to clinical management.

methodsIn the current study, we downloaded the transcriptomic and clinical data of HNSCC from The Cancer Genome Atlas and identified differentially expressed immune-related lncRNAs (DEir-lncRNAs). Further then, Cox and least absolute shrinkage and selection operator (LASSO) regression analyses were performed to identify proper DEir-lncRNAs to construct optimal risk model. Low-risk and high-risk groups were classified based on the optimal cut-off value generated by the areas under curve for receiver operating characteristic curves (AUC), and Kaplan-Meier survival curves were utilized to validate the prediction model. We then evaluated the model based on the clinical factors, immune cell infiltration, and chemotherapeutic and immunotherapeutic efficacy between two groups.

resultsIn our study, we identified 256 Deir-lncRNAs in HNSCC. A total of 18 Deir-lncRNA pairs (consisting of 35 Deir-lncRNAs) were used to construct a risk model significantly associated with survival of HNSCC. Cox proportional hazard regression analysis confirmed that our risk model could be served as an independent prognostic indicator. Besides, HNSCC patients with low-risk score significantly enriched of CD8

conclusionOur risk model could be served as a promising clinical prediction indicator, effective discoursing of the immune cell infiltration of HNSCC patients, and distinguishing patients who could benefit from chemotherapy and immunotherapy.

Indexed as

Head and Neck NeoplasmsRNA, Long NoncodingHumansImmune Checkpoint InhibitorsNeoplasm Recurrence, LocalPrognosisSquamous Cell Carcinoma of Head and NeckImmune Checkpoint InhibitorsRNA, Long Noncodingdrug sensitivityhead and neck squamous cell carcinomaimmune-related long non-coding RNAsimmunity cell infiltrationimmunotherapy

Identifiers

PMID35561269
PMCPMC9169191
OpenAlexW4280539162

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.