Evidence map›Paper›PMID 35551538›Full record

ArticlePloS one2022

Molecular epidemiology of Crimean-Congo hemorrhagic fever virus in Russia.

Anna Volynkina, Yana Lisitskaya, Albert Kolosov, Lyudmila Shaposhnikova, Sergey Pisarenko, Vladimir Dedkov, Anna Dolgova, Alexander Platonov, Alexander Kulichenko

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 16 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Anna VolynkinaStavropol Research Antiplague Institute, Federal Service for Consumer Rights Protection and Human Well-being, Stavropol, Russia.ORCID 0000-0001-5554-5882
Yana LisitskayaStavropol Research Antiplague Institute, Federal Service for Consumer Rights Protection and Human Well-being, Stavropol, Russia.
Albert KolosovStavropol Research Antiplague Institute, Federal Service for Consumer Rights Protection and Human Well-being, Stavropol, Russia.
Lyudmila ShaposhnikovaStavropol Research Antiplague Institute, Federal Service for Consumer Rights Protection and Human Well-being, Stavropol, Russia.
Sergey PisarenkoStavropol Research Antiplague Institute, Federal Service for Consumer Rights Protection and Human Well-being, Stavropol, Russia.
Vladimir DedkovSaint Petersburg Pasteur Institute, Federal Service for Consumer Rights Protection and Human Well-being, Saint Petersburg, Russia.ORCID 0000-0002-5500-0169
Anna DolgovaSaint Petersburg Pasteur Institute, Federal Service for Consumer Rights Protection and Human Well-being, Saint Petersburg, Russia.ORCID 0000-0001-8730-4872
Alexander PlatonovCentral Research Institute for Epidemiology, Federal Service for Consumer Rights Protection and Human Well-being, Moscow, Russia.
Alexander KulichenkoStavropol Research Antiplague Institute, Federal Service for Consumer Rights Protection and Human Well-being, Stavropol, Russia.
Central Research Institute of Epidemiology · RUSaint Petersburg Pasteur Institute · RUSechenov University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this report, we present new data on the diversity and geographical distribution of genetic variants in Crimean-Congo hemorrhagic fever virus (CCHFV) in Russia. Partial S, M, and L segment sequences of the CCHFV genome were obtained from 500 serum samples from CCHF patients and 103 pools of ticks collected in the south of the European region of Russia in 2007-2017. The investigated viral strains belonged to the lineages Europe 1 (596 samples), Africa 3 (1 sample) and a new genetic lineage, Europe 3 (6 samples). The Russian CCHFV strains of the Europe 1 lineage formed four subgroups (Va-Vd) correlated with the geographical site of virus isolation. Segment reassortment events between strains of different subgroups within lineage Europe 1 were revealed. The complete S, M and L genome segments of 18 CCHFV strains belonging to different subgroups of the Europe 1 lineage and the complete S segments of 3 strains of the Europe 3 lineage and 1 strain of the Africa 3 lineage were sequenced. The analysis of the geographical distribution of CCHFV genetic variants in southern Russia revealed local viral populations with partially overlapping boundaries.

Indexed as

Hemorrhagic Fever, CrimeanHemorrhagic Fever Virus, Crimean-CongoHumansMolecular EpidemiologyPhylogenyRussia

Identifiers

PMID35551538
PMCPMC9098019
OpenAlexW4280543529

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.