Evidence map›Paper›PMID 35551472›Full record

ArticleScientific reports2022

Phylogeography of the veined squid, Loligo forbesii, in European waters.

Anika Göpel, Daniel Oesterwind, Christopher Barrett, Rita Cannas, Luis Silva Caparro, Pierluigi Carbonara, Marilena Donnaloia, Maria Cristina Follesa, Angela Larivain, Vladimir Laptikhovsky and 9 more

Abstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Anika GöpelThünen Institute of Baltic Sea Fisheries, Alter Hafen Süd 2, 18069, Rostock, Germany.
Daniel OesterwindThünen Institute of Baltic Sea Fisheries, Alter Hafen Süd 2, 18069, Rostock, Germany. daniel.oesterwind@thuenen.de.
Christopher BarrettCefas Laboratory, Pakefield Rd, Lowestoft, NR33 0HT, UK.
Rita CannasDepartment of Life and Environmental Sciences, University of Cagliari, Cagliari, Italy.
Luis Silva CaparroCentro Oceanográfico de Cádiz, Instituto Español de Oceanografía, Puerto Pesquero, Muelle de Levante S/N, 11006, Cádiz, Spain.
Pierluigi CarbonaraCOISPA Tecnologia & Ricerca, Via dei Trulli, 18-20, Bari, Italy.
Marilena DonnaloiaCOISPA Tecnologia & Ricerca, Via dei Trulli, 18-20, Bari, Italy.
Maria Cristina FollesaDepartment of Life and Environmental Sciences, University of Cagliari, Cagliari, Italy.
Angela LarivainUniversity of Caen Normandy, CS 14032, 14032, Caen Cedex 05, France.
Vladimir LaptikhovskyCefas Laboratory, Pakefield Rd, Lowestoft, NR33 0HT, UK.
Evgenia LefkaditouHellenic Centre for Marine Research, Institute of Marine Biological Resources and Inland Waters, 576 SideRD Vouliagmenis Ave, 16452, Athens, Greece.
Jean-Paul RobinUniversity of Caen Normandy, CS 14032, 14032, Caen Cedex 05, France.
Maria Begoña SantosCentro Oceanográfico de Vigo, Instituto Español de Oceanografía (IEO), Subida a Radio Faro, 50, 36390, Vigo, Spain.
Ignacio SobrinoCentro Oceanográfico de Cádiz, Instituto Español de Oceanografía, Puerto Pesquero, Muelle de Levante S/N, 11006, Cádiz, Spain.
Julio ValeirasCentro Oceanográfico de Vigo, Instituto Español de Oceanografía (IEO), Subida a Radio Faro, 50, 36390, Vigo, Spain.
Maria VallsCentre Oceanográfic de les Balears s/n, Instituto Español de Oceanografía (IEO), 07015, Palma, Spain.
Hugo C VieiraCESAM - Centre for Environmental and Marine Studies, Department of Biology, University of Aveiro, Campus de Santiago, 3810-193, Aveiro, Portugal.
Kai WielandTechnical University of Denmark, National Institute of Aquatic Resources, Nordsøen Forskerpark, Willemoesvej 2, 9850, Hirtshals, Denmark.
Ralf BastropInstitute of Biological Sciences, University of Rostock, Albert-Einstein-Str. 3, 18059, Rostock, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The veined squid, Loligo forbesii Steenstrup, 1856, occurs at the European Shelf areas including the Azores and represents a valuable resource for the European commercial fishery in the North East Atlantic. However, very little is known about its population structure and phylogeography. This lack of knowledge also impedes the development of sustainable fishery management for this species. The present study combined the use of two types of markers that retrieve patterns of gene flow in different time spans; the analysis of 16 nuclear microsatellites and sequencing of the mitochondrial cytochrome oxidase subunit I (COI). Whereas the high mutation rate of microsatellites allows the description of recent patterns of connectivity in species, the lower mutation rate of COI provides phylogeographic patterns on a longer timescale. A total of 347 individuals of L. forbesii were investigated from nearly the entire distribution range of the species, including the North East Atlantic Shelf, the Azores and the Mediterranean. Individuals from the Western and Eastern Mediterranean Sea have never been included in a genetic study before. We were able to analyse COI sequences from all 12 sampling areas and define three clades of L. forbesii. Due to our large sampling area, we are presenting 13 COI-haplotypes that were previously unknown. The microsatellite analysis does not include the Azores but three main clades could be identified at the remaining 11 sampling sites. Low F

Indexed as

LoligoAnimalsDecapodiformesDNA, MitochondrialGenetics, PopulationGenetic VariationHaplotypesHumansMicrosatellite RepeatsPhylogenyPhylogeographySequence Analysis, DNADNA, Mitochondrial

Identifiers

PMID35551472
PMCPMC9098544

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.