ArticleNature genetics2022
SunUp and Sunset genomes revealed impact of particle bombardment mediated transformation and domestication history in papaya.
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Article in Nature genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.
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42 citing papers in PubMed, 71 citations in OpenAlex.
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Authors and funding
36 authors at 12 institutions in 3 countries.
Jingjing Yue *Center for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.
Robert VanBuren *Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
Juan Liu *Center for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.
Jingping Fang *Center for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.
Xingtan ZhangCenter for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.ORCID http://orcid.org/0000-0002-5207-0882
Zhenyang LiaoCenter for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.
Ching Man WaiDepartment of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.ORCID http://orcid.org/0000-0002-2913-5721
Xiuming XuCenter for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.
Shuai ChenCenter for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.
Shengchen ZhangCenter for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.
Xiaokai MaCenter for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.
Yaying MaCenter for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.
Hongying YuCenter for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.
Jing LinCenter for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.
Ping ZhouFruit Research Institute, Fujian Academy of Agricultural Sciences, Fuzhou, China.ORCID http://orcid.org/0000-0002-1738-2864
Yongji HuangInstitute of Oceanography, Minjiang University, Fuzhou, China.ORCID http://orcid.org/0000-0003-2513-5983
Ban DengCenter for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.
Fang DengCenter for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.
Xiaobing ZhaoCenter for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.
Hansong YanCenter for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.
Mahpara FatimaCenter for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.
Dessireé Zerpa-CatanhoDepartment of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
Xiaodan ZhangDepartment of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
Zhicong LinCenter for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.
Mei YangKey Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China.
Nancy J ChenDepartment of Tropical Plant and Soil Sciences, University of Hawaii at Manoa, Honolulu, HI, USA.
Eric Mora-NewcomerEstación Experimental Agrícola Fabio Baudrit Moreno, Universidad de Costa Rica, Alajuela, Costa Rica.ORCID http://orcid.org/0000-0003-4713-0622
Patricia Quesada-RojasEstación Experimental Agrícola Fabio Baudrit Moreno, Universidad de Costa Rica, Alajuela, Costa Rica.
Antonio BogantesEstación Experimental Los Diamantes, Instituto de Innovación y Transferencia de Tecnología Agropecuaria, Guápiles, Costa Rica.
Víctor M JiménezCIGRAS, Universidad de Costa Rica, San Pedro, Costa Rica.ORCID http://orcid.org/0000-0003-3771-6072
Haibao TangCenter for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.ORCID http://orcid.org/0000-0002-3460-8570
Jisen ZhangCenter for Genomics and Biotechnology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.
Ming-Li WangHawaii Agriculture Research Center, Kunia, HI, USA.
Robert E PaullDepartment of Tropical Plant and Soil Sciences, University of Hawaii at Manoa, Honolulu, HI, USA.
Qingyi YuTexas A&M AgriLife Research, Texas A&M University System, Dallas, TX, USA.ORCID http://orcid.org/0000-0001-5393-5764
Ray MingDepartment of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA. rayming@illinois.edu.ORCID http://orcid.org/0000-0002-9417-5789
Fujian Agriculture and Forestry University · CNUniversity of Illinois Urbana-Champaign · USUniversidad de Costa Rica · CRChinese Academy of Sciences · CNUniversity of Hawaiʻi at Mānoa · USFujian Academy of Agricultural Sciences · CNFujian Normal University · CNHawaii Agriculture Research Center · USMinisterio de Agricultura y Ganadería de Costa Rica · CRMinjiang University · CNTexas A&M University System · USXiamen University · CN
Funding
No grant is acknowledged in the PubMed record.
Abstract
Transgenic papaya is widely publicized for controlling papaya ringspot virus. However, the impact of particle bombardment on the genome remains unknown. The transgenic SunUp and its progenitor Sunset genomes were assembled into 351.5 and 350.3 Mb in nine chromosomes, respectively. We identified a 1.64 Mb insertion containing three transgenic insertions in SunUp chromosome 5, consisting of 52 nuclear-plastid, 21 nuclear-mitochondrial and 1 nuclear genomic fragments. A 591.9 kb fragment in chromosome 5 was translocated into the 1.64 Mb insertion. We assembled a gapless 9.8 Mb hermaphrodite-specific region of the Y
Indexed as
CaricaChromosomes, PlantDomesticationPlant BreedingSex Chromosomes
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