Evidence map›Paper›PMID 35551233›Full record

ArticleCommunications biology2022

Integrated omics approach to unveil antifungal bacterial polyynes as acetyl-CoA acetyltransferase inhibitors.

Ching-Chih Lin, Sin Yong Hoo, Li-Ting Ma, Chih Lin, Kai-Fa Huang, Ying-Ning Ho, Chi-Hui Sun, Han-Jung Lee, Pi-Yu Chen, Lin-Jie Shu and 4 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Polyyne-producingFrontiers in microbiology · 2023
    Article
  7. Mechanistic insights of magnolol antimicrobial activity againstFrontiers in cellular and infection microbiology · 2023
    Article
  8. Discovery, mode of action and secretion ofCell surface (Amsterdam, Netherlands) · 2022
    Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

Ching-Chih Lin *Agricultural Biotechnology Research Center, Academia Sinica, Nankang Dist., Taipei, 115, Taiwan.
Sin Yong Hoo *Agricultural Biotechnology Research Center, Academia Sinica, Nankang Dist., Taipei, 115, Taiwan.ORCID 0000-0002-9898-7012
Li-Ting Ma *Agricultural Biotechnology Research Center, Academia Sinica, Nankang Dist., Taipei, 115, Taiwan.
Chih LinAgricultural Biotechnology Research Center, Academia Sinica, Nankang Dist., Taipei, 115, Taiwan.
Kai-Fa HuangInstitute of Biological Chemistry, Academia Sinica, Nankang Dist., Taipei, 115, Taiwan.ORCID 0000-0001-5235-7421
Ying-Ning HoInstitute of Marine Biology and Center of Excellence for the Oceans, National Taiwan Ocean University, Jhongjheng Dist., Keelung, 202, Taiwan.
Chi-Hui SunAgricultural Biotechnology Research Center, Academia Sinica, Nankang Dist., Taipei, 115, Taiwan.
Han-Jung LeeAgricultural Biotechnology Research Center, Academia Sinica, Nankang Dist., Taipei, 115, Taiwan.
Pi-Yu ChenAgricultural Biotechnology Research Center, Academia Sinica, Nankang Dist., Taipei, 115, Taiwan.
Lin-Jie ShuAgricultural Biotechnology Research Center, Academia Sinica, Nankang Dist., Taipei, 115, Taiwan.
Bo-Wei WangAgricultural Biotechnology Research Center, Academia Sinica, Nankang Dist., Taipei, 115, Taiwan.
Wei-Chen HsuAgricultural Biotechnology Research Center, Academia Sinica, Nankang Dist., Taipei, 115, Taiwan.
Tzu-Ping KoInstitute of Biological Chemistry, Academia Sinica, Nankang Dist., Taipei, 115, Taiwan.ORCID 0000-0003-1794-2638
Yu-Liang YangAgricultural Biotechnology Research Center, Academia Sinica, Nankang Dist., Taipei, 115, Taiwan. ylyang@gate.sinica.edu.tw.ORCID 0000-0002-3533-5148
Southern Taiwan Science Park · TWAgricultural Biotechnology Research Center, Academia Sinica · TWInstitute of Biological Chemistry, Academia Sinica · TWNational Sun Yat-sen University · TWNational Taiwan Ocean University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial polyynes are highly active natural products with a broad spectrum of antimicrobial activities. However, their detailed mechanism of action remains unclear. By integrating comparative genomics, transcriptomics, functional genetics, and metabolomics analysis, we identified a unique polyyne resistance gene, masL (encoding acetyl-CoA acetyltransferase), in the biosynthesis gene cluster of antifungal polyynes (massilin A 1, massilin B 2, collimonin C 3, and collimonin D 4) of Massilia sp. YMA4. Crystallographic analysis indicated that bacterial polyynes serve as covalent inhibitors of acetyl-CoA acetyltransferase. Moreover, we confirmed that the bacterial polyynes disrupted cell membrane integrity and inhibited the cell viability of Candida albicans by targeting ERG10, the homolog of MasL. Thus, this study demonstrated that acetyl-CoA acetyltransferase is a potential target for developing antifungal agents.

Indexed as

Acetyl-CoA C-AcetyltransferaseAntifungal AgentsBacteriaCandida albicansPolyynesAcetyl-CoA C-AcetyltransferaseAntifungal AgentsPolyynes

Identifiers

PMID35551233
PMCPMC9098870
OpenAlexW4280520219

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.