Evidence map›Paper›PMID 35549553›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

Enzymes degraded under high light maintain proteostasis by transcriptional regulation in

Lei Li, Owen Duncan, Diep R Ganguly, Chun Pong Lee, Peter A Crisp, Akila Wijerathna-Yapa, Karzan Salih, Josua Trösch, Barry J Pogson, A Harvey Millar

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 14 citations in OpenAlex.

  1. Identification of Key Differentially Expressed Genes inInternational journal of molecular sciences · 2025
    Pooled it
  2. Review
  3. Article
  4. Rapid COThe Plant journal : for cell and molecular biology · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Organellar transcripts dominate the cellular mRNA pool across plants of varying ploidy levels.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Enzymes degraded under high light maintain proteostasis by transcriptional regulation inProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Lei LiFrontiers Science Center for Cell Responses, Department of Plant Biology and Ecology, College of Life Sciences, Nankai University, 300071 Tianjin, China.ORCID 0000-0003-1508-5484
Owen DuncanAustralian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Science, The University of Western Australia, Crawley, WA 6009, Australia.ORCID 0000-0001-6999-1509
Diep R GangulyAustralian Research Council Centre of Excellence in Plant Energy Biology, Research School of Biology, Australian National University, Canberra, Acton, ACT 2601, Australia.ORCID 0000-0001-6746-0181
Chun Pong LeeAustralian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Science, The University of Western Australia, Crawley, WA 6009, Australia.ORCID 0000-0002-8760-5779
Peter A CrispAustralian Research Council Centre of Excellence in Plant Energy Biology, Research School of Biology, Australian National University, Canberra, Acton, ACT 2601, Australia.ORCID 0000-0002-3655-0130
Akila Wijerathna-YapaAustralian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Science, The University of Western Australia, Crawley, WA 6009, Australia.ORCID 0000-0003-1935-8590
Karzan SalihAustralian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Science, The University of Western Australia, Crawley, WA 6009, Australia.ORCID 0000-0001-8322-0196
Josua TröschAustralian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Science, The University of Western Australia, Crawley, WA 6009, Australia.
Barry J PogsonAustralian Research Council Centre of Excellence in Plant Energy Biology, Research School of Biology, Australian National University, Canberra, Acton, ACT 2601, Australia.ORCID 0000-0003-1869-2423
A Harvey MillarAustralian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Science, The University of Western Australia, Crawley, WA 6009, Australia.ORCID 0000-0001-9679-1473
Australian Research Council · AUAustralian National University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Photoinhibitory high light stress in Arabidopsis leads to increases in markers of protein degradation and transcriptional up-regulation of proteases and proteolytic machinery, but proteostasis is largely maintained. We find significant increases in the in vivo degradation rate for specific molecular chaperones, nitrate reductase, glyceraldehyde-3 phosphate dehydrogenase, and phosphoglycerate kinase and other plastid, mitochondrial, peroxisomal, and cytosolic enzymes involved in redox shuttles. Coupled analysis of protein degradation rates, mRNA levels, and protein abundance reveal that 57% of the nuclear-encoded enzymes with higher degradation rates also had high light–induced transcriptional responses to maintain proteostasis. In contrast, plastid-encoded proteins with enhanced degradation rates showed decreased transcript abundances and must maintain protein abundance by other processes. This analysis reveals a light-induced transcriptional program for nuclear-encoded genes, beyond the regulation of the photosystem II (PSII) D1 subunit and the function of PSII, to replace key protein degradation targets in plants and ensure proteostasis under high light stress.

Indexed as

ArabidopsisArabidopsis ProteinsProteolysisProteostasisTranscription, GeneticLightPhotosystem II Protein ComplexArabidopsis ProteinsPhotosystem II Protein Complexhigh lightprotein turnoverproteostasistranslation

Identifiers

PMID35549553
PMCPMC9171785
OpenAlexW4280524161

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.