Evidence map›Paper›PMID 35549310›Full record

ArticleScience (New York, N.Y.)2022

Mapping the developing human immune system across organs.

Chenqu Suo, Emma Dann, Issac Goh, Laura Jardine, Vitalii Kleshchevnikov, Jong-Eun Park, Rachel A Botting, Emily Stephenson, Justin Engelbert, Zewen Kelvin Tuong and 18 more

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 190 papers.

0numbers the graph read from it
0cells of the map it votes in
190citing papers in PubMed
24.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

190 citing papers in PubMed, 294 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. B1 Cells for Life.Immunological reviews · 2026
    Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. What Do We Know About Immune System Aging from Human and Animal Studies?International journal of molecular sciences · 2026
    Review
  15. Review
  16. Article
  17. Animals have expanded the evolutionary legacy of unicellular ancestors in blood cells.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  18. Article
  19. Article
  20. Immune development in early life.Nature immunology · 2026
    Review

130 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

28 authors at 7 institutions in 2 countries.

Chenqu Suo *Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.ORCID 0000-0002-8813-0875
Emma Dann *Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.ORCID 0000-0002-7400-7438
Issac GohBiosciences Institute, Newcastle University, Newcastle upon Tyne, UK.ORCID 0000-0002-6397-3518
Laura JardineBiosciences Institute, Newcastle University, Newcastle upon Tyne, UK.ORCID 0000-0003-4495-8205
Vitalii KleshchevnikovWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.ORCID 0000-0001-9110-7441
Jong-Eun ParkWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.ORCID 0000-0002-1687-2423
Rachel A BottingBiosciences Institute, Newcastle University, Newcastle upon Tyne, UK.ORCID 0000-0001-9595-4605
Emily StephensonBiosciences Institute, Newcastle University, Newcastle upon Tyne, UK.ORCID 0000-0002-4244-4019
Justin EngelbertBiosciences Institute, Newcastle University, Newcastle upon Tyne, UK.
Zewen Kelvin TuongWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.ORCID 0000-0002-6735-6808
Krzysztof PolanskiWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.ORCID 0000-0002-2586-9576
Nadav YayonWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.ORCID 0000-0002-7034-0524
Chuan XuWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.ORCID 0000-0002-6265-999X
Ondrej SuchanekMolecular Immunity Unit, University of Cambridge Department of Medicine, Cambridge, UK.ORCID 0000-0003-1048-5251
Rasa ElmentaiteWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.ORCID 0000-0001-7366-5466
Cecilia Domínguez CondeWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.ORCID 0000-0002-8684-4655
Peng HeWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.ORCID 0000-0002-2457-3554
Sophie PritchardWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.
Mohi MiahBiosciences Institute, Newcastle University, Newcastle upon Tyne, UK.
Corina MoldovanDepartment of Cellular Pathology, Newcastle upon Tyne Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK.ORCID 0000-0001-5021-6473
Alexander S SteemersWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.ORCID 0000-0002-7162-7279
Pavel MazinWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.ORCID 0000-0001-9268-3352
Martin PreteWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.ORCID 0000-0002-5946-821X
Dave HorsfallBiosciences Institute, Newcastle University, Newcastle upon Tyne, UK.ORCID 0000-0002-8086-812X
John C MarioniWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.ORCID 0000-0001-9092-0852
Menna R ClatworthyWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.ORCID 0000-0002-3340-9828
Muzlifah HaniffaWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.ORCID 0000-0002-3927-2084
Sarah A TeichmannWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.ORCID 0000-0002-6294-6366
Wellcome Sanger Institute · GBNewcastle University · GBUniversity of Cambridge · GBEuropean Bioinformatics Institute · GBNewcastle upon Tyne Hospitals NHS Foundation Trust · GBCambridge University Hospitals NHS Foundation Trust · GBKorea Advanced Institute of Science and Technology · KR

Funding

Department of Health RP-2017-08-ST2-002European Research Council 646794Medical Research Council MR/S035842/1Wellcome Trust 107931Wellcome Trust 206194Wellcome Trust 211276Wellcome Trust 220268Wellcome Trust 221052
6 · The paper itself

Abstract

Single-cell genomics studies have decoded the immune cell composition of several human prenatal organs but were limited in describing the developing immune system as a distributed network across tissues. We profiled nine prenatal tissues combining single-cell RNA sequencing, antigen-receptor sequencing, and spatial transcriptomics to reconstruct the developing human immune system. This revealed the late acquisition of immune-effector functions by myeloid and lymphoid cell subsets and the maturation of monocytes and T cells before peripheral tissue seeding. Moreover, we uncovered system-wide blood and immune cell development beyond primary hematopoietic organs, characterized human prenatal B1 cells, and shed light on the origin of unconventional T cells. Our atlas provides both valuable data resources and biological insights that will facilitate cell engineering, regenerative medicine, and disease understanding.

Indexed as

Immune SystemLymphocytesMonocytesGenomicsHumansOrgan SpecificityRNA-SeqSingle-Cell Analysis

Identifiers

PMID35549310
PMCPMC7612819
OpenAlexW4280578638

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.