Evidence map›Paper›PMID 35545668›Full record

ArticleNature2022

Structural basis of NPR1 in activating plant immunity.

Shivesh Kumar, Raul Zavaliev, Qinglin Wu, Ye Zhou, Jie Cheng, Lucas Dillard, Jordan Powers, John Withers, Jinshi Zhao, Ziqiang Guan and 4 more

Open access · greenAbstract read
In one paragraph

Article in Nature, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
38.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 185 citations in OpenAlex.

  1. Article
  2. Identification of theBiology · 2026
    Article
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  5. Towards an integrated molecular understanding of plant hormones.Journal of integrative plant biology · 2026
    Review
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  13. Review
  14. Autonomous Redox Rhythms and Their Coupling to the Circadian Clock.Advances in experimental medicine and biology · 2026
    Review
  15. Article
  16. Review
  17. Establishment of a TRV-VIGS system in Coix (Frontiers in plant science · 2026
    Article
  18. Article
  19. Article
  20. Cellular energy sensor SnRK1 suppresses salicylic acid-dependent and -independent defenses and bacterial resistance inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Shivesh Kumar *Department of Biochemistry, Duke University School of Medicine, Durham, NC, USA.
Raul Zavaliev *Department of Biology, Duke University, Durham, NC, USA.
Qinglin Wu *Department of Biochemistry, Duke University School of Medicine, Durham, NC, USA.
Ye ZhouDepartment of Computer Science, Duke University, Durham, NC, USA.
Jie ChengDepartment of Biochemistry, Duke University School of Medicine, Durham, NC, USA.
Lucas DillardGenome Integrity and Structural Biology Laboratory, National Institute of Environmental Health Sciences, NIH, Department of Health and Human Services, Research Triangle Park, NC, USA.
Jordan PowersDepartment of Biology, Duke University, Durham, NC, USA.
John WithersDepartment of Biology, Duke University, Durham, NC, USA.
Jinshi ZhaoDepartment of Biochemistry, Duke University School of Medicine, Durham, NC, USA.
Ziqiang GuanDepartment of Biochemistry, Duke University School of Medicine, Durham, NC, USA.ORCID http://orcid.org/0000-0002-8082-3423
Mario J BorgniaGenome Integrity and Structural Biology Laboratory, National Institute of Environmental Health Sciences, NIH, Department of Health and Human Services, Research Triangle Park, NC, USA.ORCID http://orcid.org/0000-0001-9159-1413
Alberto BartesaghiDepartment of Biochemistry, Duke University School of Medicine, Durham, NC, USA.ORCID http://orcid.org/0000-0002-7360-1523
Xinnian DongDepartment of Biology, Duke University, Durham, NC, USA. xdong@duke.edu.ORCID http://orcid.org/0000-0002-1120-0951
Pei ZhouDepartment of Biochemistry, Duke University School of Medicine, Durham, NC, USA. peizhou@biochem.duke.edu.ORCID http://orcid.org/0000-0002-7823-3416
Duke University · USHoward Hughes Medical Institute · USNational Institute of Environmental Health Sciences · US

Funding

Virology Research Program (Program 4)P30CA016086 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Deborah F. Tate · 1985 to 2026
$201.5M
User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI MALCOLM S. CAPEL · 2018 to 2026
$34.2M
NIEHS Cryo-EM Core FacilityZICES103326 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI BORGNIA, MARIO · 2017 to 2025
$17.0M
Salicylic Acid in Immunity and Health: A Small Phytohormone with Big Physiological ImpactsR35GM118036 · NIGMS · DUKE UNIVERSITY · PI Xinnian Dong · 2016 to 2026
$4.0M
Adaptive alterations of lipids in mitis group streptococciR01AI148366 · NIAID · UNIVERSITY OF TEXAS DALLAS · PI GUAN, ZIQIANG, PALMER, KELLI LEA · 2020 to 2024
$2.5M
Pixel Array Detector for X-ray CrystallographyS10RR029205 · NCRR · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2010 to 2010
$1.8M
Mechanistic Insights into the Plant Disease Resistance Mediated by NPR1R01GM145026 · NIGMS · DUKE UNIVERSITY · PI ZHOU, PEI · 2022 to 2025
$1.7M
A Computational Platform for In-Situ Structure Determination at Near-Atomic Resolution using Cryo-Electron TomographyR01GM141223 · NIGMS · DUKE UNIVERSITY · PI BARTESAGHI, ALBERTO · 2021 to 2024
$1.5M
Biochemistry and Structure of Lipid A EnzymesR01GM115355 · NIGMS · DUKE UNIVERSITY · PI ZHOU, PEI · 2016 to 2019
$1.2M
Howard Hughes Medical InstituteIntramural NIH HHS ZIC ES103326NCI NIH HHS P30 CA016086NCRR NIH HHS S10 RR029205NIAID NIH HHS R01 AI148366NIGMS NIH HHS P30 GM124165NIGMS NIH HHS R01 GM115355NIGMS NIH HHS R01 GM141223NIGMS NIH HHS R01 GM145026NIGMS NIH HHS R35 GM118036
6 · The paper itself

Abstract

NPR1 is a master regulator of the defence transcriptome induced by the plant immune signal salicylic acid

Indexed as

ArabidopsisArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsCryoelectron MicroscopyGene Expression ProfilingGene Expression Regulation, PlantPlant ImmunityPlant ProteinsSalicylic AcidTranscription FactorsArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsNPR1 protein, ArabidopsisPlant ProteinsSalicylic AcidTranscription Factors

Identifiers

PMID35545668
PMCPMC9346951
OpenAlexW4280516302

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.