Evidence map›Paper›PMID 35544689›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

A proposed unified mitotic chromosome architecture.

John Sedat, Angus McDonald, Herbert Kasler, Eric Verdin, Hu Cang, Muthuvel Arigovindan, Cornelis Murre, Michael Elbaum

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Helical coiled nucleosome chromosome architectures during cell cycle progression.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Article
  6. Multi-Scale Imaging of the Dynamic Organization of Chromatin.International journal of molecular sciences · 2023
    Review
  7. Article
  8. A proposed unified interphase nucleus chromosome structure: Preliminary preponderance of evidence.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

John SedatDepartment of Biochemistry and Biophysics, University of California, San Francisco, CA 94158.
Angus McDonaldMicron School of Materials Science and Engineering, Boise State University, Boise, ID 83725-2090.
Herbert KaslerBuck Institute for Research on Aging, Novato, CA 94945.
Eric VerdinBuck Institute for Research on Aging, Novato, CA 94945.
Hu CangSalk Institute for Biological Studies, La Jolla, CA 92037.
Muthuvel ArigovindanDepartment of Electrical Engineering, Indian Institute of Science, Bengluru 560012, India.
Cornelis MurreDivision of Biological Sciences, University of California San Diego, La Jolla, CA 92092.
Michael ElbaumDepartment of Chemical and Biological Physics, Weizmann Institute of Science, 760001 Rehovot, Israel.ORCID 0000-0001-7915-5512

Funding

The 3D-Structures of the Immunoglobulin Heavy Chain LocusR01AI082850 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MURRE, CORNELIS · 2009 to 2024
$5.4M
NIAID NIH HHS R01 AI082850
6 · The paper itself

Abstract

A molecular architecture is proposed for a representative mitotic chromosome, human chromosome 10. This architecture is built on an interphase chromosome structure based on cryo-electron microscopy (cryo-EM) cellular tomography [J. Sedat et al., Proc. Natl. Acad. Sci. U.S.A., in press], thus unifying chromosome structure throughout the complete mitotic cycle. The basic organizational principle for mitotic chromosomes is specific coiling of the 11-nm nucleosome fiber into large scale, ∼200-nm interphase structures, a Slinky [https://en.wikipedia.org/wiki/Slinky; motif cited in S. Bowerman et al., eLife 10, e65587 (2021)], then further modified with subsequent additional coiling for the final mitotic chromosome structure. The final mitotic chromosome architecture accounts for the dimensional values as well as the well-known cytological configurations. In addition, proof is experimentally provided by digital PCR technology that G1 T cell nuclei are diploid with one DNA molecule per chromosome. Many nucleosome linker DNA sequences, the promotors and enhancers, are suggestive of optimal exposure on the surfaces of the large-scale coils.

Indexed as

Chromosomes, Human, Pair 10DNA PackagingMitosisNucleosomesCell NucleusG1 PhaseHumansPolymerase Chain ReactionT-LymphocytesNucleosomesbiophysics and computational structure analysiscell biologychromosome structurecomputational structure analysis

Identifiers

PMID35544689
PMCPMC9171755

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.