Evidence map›Paper›PMID 35542176›Full record

ArticleSTAR protocols2022

A permeability assay for mouse intestinal organoids.

Stijn Aaron den Daas, Ugo Soffientini, Shilpa Chokshi, Gautam Mehta

Abstract read
In one paragraph

Article in STAR protocols, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Utilizing the apical-out enteroidsFrontiers in physiology · 2024
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Stijn Aaron den DaasRoger Williams Institute of Hepatology, Foundation for Liver Research, London SE5 9NT, UK.
Ugo SoffientiniRoger Williams Institute of Hepatology, Foundation for Liver Research, London SE5 9NT, UK.
Shilpa ChokshiRoger Williams Institute of Hepatology, Foundation for Liver Research, London SE5 9NT, UK.
Gautam MehtaRoger Williams Institute of Hepatology, Foundation for Liver Research, London SE5 9NT, UK.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Here, we describe an assay for intestinal permeability in mouse intestinal organoids, although this may also be adapted for other species. Propidium iodide (PI) does not penetrate intact biological membranes and thus cannot enter the lumen of intact organoids. Passage of PI within the lumen can be induced by tight junction disruption or epithelial cell death. This technique measures PI-stained extruded dead cells within the organoid lumen to analyze the effect of insults, toxins, or treatments on intestinal organoid permeability.

Indexed as

Intestinal MucosaOrganoidsAnimalsIntestinesMicePermeabilityTight JunctionsHealth SciencesModel OrganismsOrganoids

Identifiers

PMID35542176
PMCPMC9079111

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.