Evidence map›Paper›PMID 35539643›Full record

ArticleRSC advances2018

Selection of aptamers for AMACR detection from DNA libraries with different primers.

Deng-Kai Yang, Chia-Fu Chou, Lin-Chi Chen

Abstract read
In one paragraph

Article in RSC advances, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Inside the Black Box: What Makes SELEX Better?Molecules (Basel, Switzerland) · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Deng-Kai YangDepartment of Bio-Industrial Mechatronics Engineering, National Taiwan University No. 1 Roosevelt Road Section 4 Taipei Taiwan 10617 R. O. C chenlinchi@ntu.edu.tw +886-2-2362-7620 +886-2-3366-5343.ORCID https://orcid.org/0000-0001-5161-8052
Chia-Fu ChouInstitute of Physics, Academia Sinica 128 Academia Rd. Sec. 2, Nangang District Taipei Taiwan 11574 R. O. C.
Lin-Chi ChenDepartment of Bio-Industrial Mechatronics Engineering, National Taiwan University No. 1 Roosevelt Road Section 4 Taipei Taiwan 10617 R. O. C chenlinchi@ntu.edu.tw +886-2-2362-7620 +886-2-3366-5343.ORCID https://orcid.org/0000-0001-5947-2019

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this work, we investigated aptamer selection against alpha-methylacyl-CoA racemase (AMACR) with three DNA libraries bearing different primers. Because of increased selection diversity, aptamers with varied structural properties, such as pre-folded, induced-folding, high and low primer-dependent conformations, were discovered. From the selection results, a dimeric aptamer was constructed and capable of detecting over-expression of AMACR in prostate cancer cell lines. In summary, this study demonstrates a library-based approach to obtain aptamers with different binding properties and provides distinct aptamers for flexible design of AMACR detection.

Identifiers

PMID35539643
PMCPMC9080631

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.