Evidence map›Paper›PMID 35537981›Full record

ArticleVirologica Sinica2022

Identification and genetic characterization of bovine hepacivirus in China: A large scale epidemiological study.

Gang Lu, Chaoxi Chen, Ran Shao, Juan Zhang, Jinghao Li, Siqi Cai, Lintao Zhong, Zhiying Lai, Jiajun Ou, Xin Yin and 2 more

Open access · hybridAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Virologica Sinica, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Gang LuCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, 510642, China; State Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute, The Chinese Academy of Agricultural Sciences, Harbin, 150000, China; Guangdong Provincial Key Laboratory of Prevention and Control for Severe Clinical Animal Diseases, Guangzhou, 510642, China; Guangdong Technological Engineering Research Center for Pet, Guangzhou, 510642, China.
Chaoxi ChenCollege of Life Science and Technology, Southwest Minzu University, Chengdu, 610041, China.
Ran ShaoCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, 510642, China; Guangdong Provincial Key Laboratory of Prevention and Control for Severe Clinical Animal Diseases, Guangzhou, 510642, China; Guangdong Technological Engineering Research Center for Pet, Guangzhou, 510642, China.
Juan ZhangState Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute, The Chinese Academy of Agricultural Sciences, Harbin, 150000, China.
Jinghao LiGeneral Station of Forest and Grassland Pest Management, National Forestry and Grassland Administration, Shenyang, 110000, China.
Siqi CaiCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, 510642, China; Guangdong Provincial Key Laboratory of Prevention and Control for Severe Clinical Animal Diseases, Guangzhou, 510642, China; Guangdong Technological Engineering Research Center for Pet, Guangzhou, 510642, China.
Lintao ZhongCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, 510642, China; Guangdong Provincial Key Laboratory of Prevention and Control for Severe Clinical Animal Diseases, Guangzhou, 510642, China; Guangdong Technological Engineering Research Center for Pet, Guangzhou, 510642, China.
Zhiying LaiCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, 510642, China; Guangdong Provincial Key Laboratory of Prevention and Control for Severe Clinical Animal Diseases, Guangzhou, 510642, China; Guangdong Technological Engineering Research Center for Pet, Guangzhou, 510642, China.
Jiajun OuCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, 510642, China; Guangdong Provincial Key Laboratory of Prevention and Control for Severe Clinical Animal Diseases, Guangzhou, 510642, China; Guangdong Technological Engineering Research Center for Pet, Guangzhou, 510642, China.
Xin YinState Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute, The Chinese Academy of Agricultural Sciences, Harbin, 150000, China. Electronic address: yinxin@caas.cn.
Guihong ZhangCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, 510642, China. Electronic address: guihongzh@scau.edu.cn.
Shoujun LiCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, 510642, China; Guangdong Provincial Key Laboratory of Prevention and Control for Severe Clinical Animal Diseases, Guangzhou, 510642, China; Guangdong Technological Engineering Research Center for Pet, Guangzhou, 510642, China. Electronic address: shoujunli@scau.edu.cn.
South China Agricultural University · CNChinese Academy of Agricultural Sciences · CNSouthwest Minzu University · CNState Forestry and Grassland Administration · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bovine hepacivirus (BovHepV) is a novel virus that was recently discovered in Ghana and Germany in 2015. Until now, this virus has been identified in cattle population worldwide and is classified into subtypes A-G. To fully understand the epidemic situation and genetic characteristic of BovHepV in China, a total of 612 cattle serum samples were collected from 20 farms in seven provinces and municipality in China between 2018 and 2020 and were tested for the presence of BovHepV RNA via semi-nested PCR. The results demonstrated that 49 (8.0%) samples were BovHepV RNA-positive. It is noted that BovHepV infection in yak was confirmed for the first time. BovHepV was detected in all the seven provinces, with the positive rate ranging from 3.1% to 13.3%, which indicates a wide geographical distribution pattern of BovHepV in China. Sequencing results revealed that 5' UTR of the 49 field BovHepV strains have a nucleotide similarity of 96.3%-100% between each other and 93.9%-100% with previously reported BovHepV strains. In addition, genetic analysis identified five critical nucleotide sites in 5' UTR to distinguish different subtypes, which was further verified by genomic sequencing and nucleotide similarity analysis. All the 49 Chinese field BovHepV strains were classified into subtype G and this subtype is only determined in cattle in China currently. This study will provide insights for us to better understand the epidemiology and genetic diversity of BovHepV.

Indexed as

HepacivirusNucleotides5' Untranslated RegionsAnimalsCattleChinaEpidemiologic StudiesGenetic VariationGenotypePhylogeny5' Untranslated RegionsNucleotidesBovine hepacivirus (BovHepV)CattleChinaEpidemiologyGenetic diversity

Identifiers

PMID35537981
PMCPMC9170970
OpenAlexW4212788902

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.