Evidence map›Paper›PMID 35536024›Full record

ArticleMicrobiology spectrum2022

Comparative Genomics Revealed Wide Intra-Species Genetic Heterogeneity and Lineage-Specific Genes of

Weicheng Li, Jiaqi Sun, Yongjian Jing, Jie Zhao, Qiong Wu, Jiaqi Liu, Lai-Yu Kwok, Wenguang Zhang, Zhihong Sun, Zhi Zhong and 1 more

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
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  3. Frontiers in microbiology · 2025
    Review
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  5. Pangenomic analysis identifies correlations betweenMicrobiome research reports · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Weicheng Li *Key Laboratory of Dairy Biotechnology and Engineering (IMAU), Ministry of Education; Key Laboratory of Dairy Products Processing, Ministry of Agriculture and Rural Affairs; Inner Mongolia Key Laboratory of Dairy Biotechnology and Engineering; Collaborative Innovative Center of Ministry of Education for Lactic Acid Bacteria and Fermented Dairy Products, Inner Mongolia Agricultural Universitygrid.411638.9, Hohhot, China.ORCID 0000-0001-9880-9390
Jiaqi Sun *Key Laboratory of Dairy Biotechnology and Engineering (IMAU), Ministry of Education; Key Laboratory of Dairy Products Processing, Ministry of Agriculture and Rural Affairs; Inner Mongolia Key Laboratory of Dairy Biotechnology and Engineering; Collaborative Innovative Center of Ministry of Education for Lactic Acid Bacteria and Fermented Dairy Products, Inner Mongolia Agricultural Universitygrid.411638.9, Hohhot, China.
Yongjian Jing *Center of Information and Network Technology, Inner Mongolia Agricultural Universitygrid.411638.9, Hohhot, China.
Jie ZhaoKey Laboratory of Dairy Biotechnology and Engineering (IMAU), Ministry of Education; Key Laboratory of Dairy Products Processing, Ministry of Agriculture and Rural Affairs; Inner Mongolia Key Laboratory of Dairy Biotechnology and Engineering; Collaborative Innovative Center of Ministry of Education for Lactic Acid Bacteria and Fermented Dairy Products, Inner Mongolia Agricultural Universitygrid.411638.9, Hohhot, China.
Qiong WuKey Laboratory of Dairy Biotechnology and Engineering (IMAU), Ministry of Education; Key Laboratory of Dairy Products Processing, Ministry of Agriculture and Rural Affairs; Inner Mongolia Key Laboratory of Dairy Biotechnology and Engineering; Collaborative Innovative Center of Ministry of Education for Lactic Acid Bacteria and Fermented Dairy Products, Inner Mongolia Agricultural Universitygrid.411638.9, Hohhot, China.
Jiaqi LiuKey Laboratory of Dairy Biotechnology and Engineering (IMAU), Ministry of Education; Key Laboratory of Dairy Products Processing, Ministry of Agriculture and Rural Affairs; Inner Mongolia Key Laboratory of Dairy Biotechnology and Engineering; Collaborative Innovative Center of Ministry of Education for Lactic Acid Bacteria and Fermented Dairy Products, Inner Mongolia Agricultural Universitygrid.411638.9, Hohhot, China.
Lai-Yu KwokKey Laboratory of Dairy Biotechnology and Engineering (IMAU), Ministry of Education; Key Laboratory of Dairy Products Processing, Ministry of Agriculture and Rural Affairs; Inner Mongolia Key Laboratory of Dairy Biotechnology and Engineering; Collaborative Innovative Center of Ministry of Education for Lactic Acid Bacteria and Fermented Dairy Products, Inner Mongolia Agricultural Universitygrid.411638.9, Hohhot, China.
Wenguang ZhangInner Mongolia Engineering Research Center of Genomic Big Data for Agriculture, Inner Mongolia Agricultural Universitygrid.411638.9, Hohhot, China.
Zhihong SunKey Laboratory of Dairy Biotechnology and Engineering (IMAU), Ministry of Education; Key Laboratory of Dairy Products Processing, Ministry of Agriculture and Rural Affairs; Inner Mongolia Key Laboratory of Dairy Biotechnology and Engineering; Collaborative Innovative Center of Ministry of Education for Lactic Acid Bacteria and Fermented Dairy Products, Inner Mongolia Agricultural Universitygrid.411638.9, Hohhot, China.ORCID 0000-0002-7605-2048
Zhi ZhongKey Laboratory of Dairy Biotechnology and Engineering (IMAU), Ministry of Education; Key Laboratory of Dairy Products Processing, Ministry of Agriculture and Rural Affairs; Inner Mongolia Key Laboratory of Dairy Biotechnology and Engineering; Collaborative Innovative Center of Ministry of Education for Lactic Acid Bacteria and Fermented Dairy Products, Inner Mongolia Agricultural Universitygrid.411638.9, Hohhot, China.
Wenjun LiuKey Laboratory of Dairy Biotechnology and Engineering (IMAU), Ministry of Education; Key Laboratory of Dairy Products Processing, Ministry of Agriculture and Rural Affairs; Inner Mongolia Key Laboratory of Dairy Biotechnology and Engineering; Collaborative Innovative Center of Ministry of Education for Lactic Acid Bacteria and Fermented Dairy Products, Inner Mongolia Agricultural Universitygrid.411638.9, Hohhot, China.ORCID 0000-0002-2773-8043
Inner Mongolia Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Akkermansia muciniphila has potential as a next-generation probiotic, but few previous studies attempted to analyze its intraspecies population diversity. In this study, we performed a comparative genomic analysis of 112 filtered genomes from the NCBI database. The populations formed three clades (A-C) on the phylogenetic tree, suggesting the existence of three genetic lineages though clades B and C were phylogenetically closer than clade A. The three clades also showed geographic-based clustering, different genetic characteristics, and clade-specific genes. Two putative functional genes (

Indexed as

Genetic HeterogeneityProbioticsAkkermansiaCarbohydratesGenomicsPhylogenyVerrucomicrobiaCarbohydratesAkkermansia muciniphilacarbohydrate metabolismgut microbenext-generation probioticsrecombination

Identifiers

PMID35536024
PMCPMC9241678
OpenAlexW4229457807

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.