Evidence map›Paper›PMID 35533956›Full record

ArticleEuropean journal of medical genetics2022

Do paternal deletions involving the FOXF1 locus on chromosome 16q24.1 manifest with more severe non-lung anomalies?

Esra Yıldız Bölükbaşı, Justyna A Karolak, Tomasz Gambin, Przemyslaw Szafranski, Gail H Deutsch, Paweł Stankiewicz

Open access · greenAbstract read
In one paragraph

Article in European journal of medical genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Esra Yıldız BölükbaşıDepartment of Molecular & Human Genetics, Baylor College of Medicine, Houston, TX, USA.
Justyna A KarolakChair and Department of Genetics and Pharmaceutical Microbiology, Poznan University of Medical Sciences, Poznan, Poland.
Tomasz GambinDepartment of Molecular & Human Genetics, Baylor College of Medicine, Houston, TX, USA; Institute of Computer Science, Warsaw University of Technology, Warsaw, Poland.
Przemyslaw SzafranskiDepartment of Molecular & Human Genetics, Baylor College of Medicine, Houston, TX, USA.
Gail H DeutschDepartment of Pathology, University of Washington School of Medicine, Seattle, WA, USA.
Paweł StankiewiczDepartment of Molecular & Human Genetics, Baylor College of Medicine, Houston, TX, USA. Electronic address: pawels@bcm.edu.
Baylor College of Medicine · USPoznan University of Medical Sciences · PLUniversity of Washington · US

Funding

Epigenomic dysfunction at 16q24.1 vascular defects and perinatal consequencesR01HL137203 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI STANKIEWICZ, PAWEL · 2017 to 2020
$2.0M
NHLBI NIH HHS R01 HL137203
6 · The paper itself

Abstract

Alveolar capillary dysplasia with misalignment of pulmonary veins (ACDMPV) is a rare lethal lung developmental disorder in neonates due to heterozygous loss-of-function of the mesenchymal transcription factor gene, FOXF1. Interestingly, unlike ACDMPV-causing point mutations in FOXF1 that can be inherited from the mother or father, causative copy-number variant (CNV) deletions arise de novo and almost exclusively on chromosome 16 inherited from the mother (n = 50 vs. n = 3). Here, we describe a fourth case of a de novo paternal CNV deletion encompassing FOXF1, its neighboring long non-coding RNA gene FENDRR, and their distant lung-specific enhancer, identified in a 21-week-old fetus with tetralogy of Fallot, gastrointestinal and genitourinary abnormalities, a single umbilical artery, and patchy histopathological findings of ACDMPV in autopsy lung. We also review the ACDMPV-causative CNV deletions detected prenatally and propose that the majority of paternal deletions manifest with more severe additional non-lung abnormalities.

Indexed as

Persistent Fetal Circulation SyndromeChromosomes, Human, Pair 1FathersForkhead Transcription FactorsHumansInfant, NewbornMalePulmonary AlveoliForkhead Transcription FactorsFOXF1 protein, humanAllelic imbalanceGene regulationLethal lung developmental disordersParental origin

Identifiers

PMID35533956
PMCPMC10022888
OpenAlexW4229003023

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.