Evidence map›Paper›PMID 35532072›Full record

ArticleRheumatology (Oxford, England)2023

Panel sequencing links rare, likely damaging gene variants with distinct clinical phenotypes and outcomes in juvenile-onset SLE.

Amandine Charras, Sam Haldenby, Eve M D Smith, Naomi Egbivwie, Lisa Olohan, John G Kenny, Klaus Schwarz, Carla Roberts, Eslam Al-Abadi, Kate Armon and 16 more

Open access · bronzeAbstract read
In one paragraph

Article in Rheumatology (Oxford, England), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 33 citations in OpenAlex.

  1. Guideline
  2. How loss-of-function mutations inJournal of translational autoimmunity · 2026
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  12. Towards precision medicine for systemic lupus erythematosus and neuropsychiatric manifestations.Expert review of precision medicine and drug development · 2025
    Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Mendelian Causes of Autoimmunity: the Lupus Phenotype.Journal of clinical immunology · 2024
    Review
  18. Lupus Nephritis Biomarkers: A Critical Review.International journal of molecular sciences · 2024
    Review
  19. Review
  20. Case Report: p40Frontiers in pediatrics · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 20 institutions in 5 countries.

Amandine CharrasDepartment of Women's & Children's Health, Institute of Life Course and Medical Sciences.ORCID 0000-0001-6760-5459
Sam HaldenbyCentre for Genomic Research, Institute of Infection, Veterinary & Ecological Sciences, University of Liverpool.
Eve M D SmithDepartment of Women's & Children's Health, Institute of Life Course and Medical Sciences.ORCID 0000-0002-8371-7597
Naomi EgbivwieDepartment of Women's & Children's Health, Institute of Life Course and Medical Sciences.
Lisa OlohanCentre for Genomic Research, Institute of Infection, Veterinary & Ecological Sciences, University of Liverpool.ORCID 0000-0001-7837-0157
John G KennyCentre for Genomic Research, Institute of Infection, Veterinary & Ecological Sciences, University of Liverpool.
Klaus SchwarzInstitut for Transfusion Medicine, University Ulm, Ulm.
Carla RobertsDepartment of Women's & Children's Health, Institute of Life Course and Medical Sciences.
Eslam Al-AbadiDepartment of Rheumatology, Birmingham Children's Hospital, Birmingham.ORCID 0000-0002-1999-6341
Kate ArmonDepartment of Paediatric Rheumatology, Cambridge University Hospitals, Cambridge.
Kathryn BaileyDepartment of Paediatric Rheumatology, Oxford University Hospitals NHS Foundation Trust, Oxford.
Coziana CiurtinCentre for Adolescent Rheumatology, University College London, London.ORCID 0000-0002-8911-4113
Janet Gardner-MedwinDepartment of Child Health, University of Glasgow, Glasgow.
Kirsty HaslamDepartment of Paediatrics, Bradford Royal Infirmary, Bradford.
Daniel P HawleyDepartment of Paediatric Rheumatology, Sheffield Children's Hospital, Sheffield.
Alice LeahyDepartment of Paediatric Rheumatology, Southampton General Hospital, Southampton.
Valentina LeoneDepartment of Paediatric Rheumatology, Leeds Children Hospital, Leeds.
Flora McErlanePaediatric Rheumatology, Great North Children's Hospital, Royal Victoria Infirmary, Institute of Cellular Medicine, Newcastle University, Newcastle upon Tyne.
Gita ModgilDepartment of Paediatrics, Musgrove Park Hospital, Taunton.
Clarissa PilkingtonDepartment of Paediatric Rheumatology, Great Ormond Street Hospital, London.
Athimalaipet V RamananUniversity Hospitals Bristol NHS Foundation Trust & Bristol Medical School, University of Bristol, Bristol.ORCID 0000-0001-8663-2401
Satyapal RangarajDepartment of Paediatric Rheumatology, Nottingham University Hospitals, Nottingham.
Phil RileyDepartment of Paediatric Rheumatology, Royal Manchester Children's Hospital, Manchester.
Arani SridharDepartment of Paediatrics, Leicester Royal Infirmary, Leicester, UK.
Michael W BeresfordDepartment of Women's & Children's Health, Institute of Life Course and Medical Sciences.
Christian M HedrichDepartment of Women's & Children's Health, Institute of Life Course and Medical Sciences.ORCID 0000-0002-1295-6179
University of Liverpool · GBAlder Hey Children's NHS Foundation Trust · GBBirmingham Children's Hospital · GBBradford Royal Infirmary · GBGerman Red Cross · DEGreat Ormond Street Hospital · GBLeeds Teaching Hospitals NHS Trust · GBLeicester Royal Infirmary · GBMusgrove Park Hospital · GBNottingham University Hospitals NHS Trust · GBOxford University Hospitals NHS Trust · GBRoyal Manchester Children's Hospital · GBRoyal Victoria Infirmary · GBSheffield Children's Hospital · GBSouthampton General Hospital · GBTeagasc - The Irish Agriculture and Food Development Authority · IEUniversity College London · GBUniversity Hospitals Bristol NHS Foundation Trust · GBUniversity of Cambridge · GBUniversity of Glasgow · GB

Funding

Medical Research Council MR/R013926/1Versus Arthritis 22203Versus Arthritis 22908
6 · The paper itself

Abstract

objectivesJuvenile-onset systemic lupus erythematosus (jSLE) affects 15-20% of lupus patients. Clinical heterogeneity between racial groups, age groups and individual patients suggests variable pathophysiology. This study aimed to identify highly penetrant damaging mutations in genes associated with SLE/SLE-like disease in a large national cohort (UK JSLE Cohort Study) and compare demographic, clinical and laboratory features in patient sub-cohorts with 'genetic' SLE vs remaining SLE patients.

methodsBased on a sequencing panel designed in 2018, target enrichment and next-generation sequencing were performed in 348 patients to identify damaging gene variants. Findings were integrated with demographic, clinical and treatment related datasets.

resultsDamaging gene variants were identified in ∼3.5% of jSLE patients. When compared with the remaining cohort, 'genetic' SLE affected younger children and more Black African/Caribbean patients. 'Genetic' SLE patients exhibited less organ involvement and damage, and neuropsychiatric involvement developed over time. Less aggressive first line treatment was chosen in 'genetic' SLE patients, but more second and third line agents were used. 'Genetic' SLE associated with anti-dsDNA antibody positivity at diagnosis and reduced ANA, anti-LA and anti-Sm antibody positivity at last visit.

conclusionApproximately 3.5% of jSLE patients present damaging gene variants associated with younger age at onset, and distinct clinical features. As less commonly observed after treatment induction, in 'genetic' SLE, autoantibody positivity may be the result of tissue damage and explain reduced immune complex-mediated renal and haematological involvement. Routine sequencing could allow for patient stratification, risk assessment and target-directed treatment, thereby increasing efficacy and reducing toxicity.

Indexed as

Lupus Erythematosus, SystemicAge of OnsetCohort StudiesHumansKidneyPhenotypechildhoodgeneticjSLEjuvenile-onsetmonogenicpaediatricSLEstratification

Identifiers

PMID35532072
PMCPMC9949710
OpenAlexW4229454135

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.