Evidence map›Paper›PMID 35524450›Full record

ArticleThe New phytologist2022

The gibberellic acid derived from the plastidial MEP pathway is involved in the accumulation of Bamboo mosaic virus.

Ying-Ping Huang, I-Hsuan Chen, Yu-Shun Kao, Yau-Heiu Hsu, Ching-Hsiu Tsai

Open access · hybridAbstract read
In one paragraph

Article in The New phytologist, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 5 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ying-Ping HuangGraduate Institute of Biotechnology, National Chung Hsing University, Taichung, 402, Taiwan.ORCID 0000-0002-2446-8412
I-Hsuan ChenGraduate Institute of Biotechnology, National Chung Hsing University, Taichung, 402, Taiwan.ORCID 0000-0003-1562-2657
Yu-Shun KaoGraduate Institute of Biotechnology, National Chung Hsing University, Taichung, 402, Taiwan.ORCID 0000-0002-7528-7726
Yau-Heiu HsuGraduate Institute of Biotechnology, National Chung Hsing University, Taichung, 402, Taiwan.ORCID 0000-0002-3071-4253
Ching-Hsiu TsaiGraduate Institute of Biotechnology, National Chung Hsing University, Taichung, 402, Taiwan.ORCID 0000-0003-3744-8821
National Chung Hsing University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A gene upregulated in Nicotiana benthamiana after Bamboo mosaic virus (BaMV) infection was revealed as 1-deoxy-d-xylulose-5-phosphate reductoisomerase (NbDXR). DXR is the key enzyme in the 2-C-methyl-d-erythritol-4-phosphate (MEP) pathway that catalyzes the conversion of 1-deoxy-d-xylulose 5-phosphate to 2-C-methyl-d-erythritol-4-phosphate. Knockdown and overexpression of NbDXR followed by BaMV inoculation revealed that NbDXR is involved in BaMV accumulation. Treating leaves with fosmidomycin, an inhibitor of DXR function, reduced BaMV accumulation. Subcellular localization confirmed that DXR is a chloroplast-localized protein by confocal microscopy. Furthermore, knockdown of 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate reductase, one of the enzymes in the MEP pathway, also reduced BaMV accumulation. The accumulation of BaMV increased significantly in protoplasts treated with isopentenyl pyrophosphate. Thus, the metabolites of the MEP pathway could be involved in BaMV infection. To identify the critical components involved in BaMV accumulation, we knocked down the crucial enzyme of isoprenoid synthesis, NbGGPPS11 or NbGGPPS2. Only NbGGPPS2 was involved in BaMV infection. The geranylgeranyl pyrophosphate (GGPP) synthesized by NbGGPPS2 is known for gibberellin synthesis. We confirmed this result by supplying gibberellic acid exogenously on leaves, which increased BaMV accumulation. The de novo synthesis of gibberellic acid could assist BaMV accumulation.

Indexed as

GibberellinsPotexvirusErythritolNicotianaSugar Phosphates2-C-methylerythritol 4-phosphateErythritolgibberellic acidGibberellinsSugar Phosphates2-C-methyl-d-erythritol-4-phosphate (MEP) pathwaybamboo mosaic virus (BaMV)geranylgeranyl pyrophosphate (GGPP) synthasesgibberellic acid (GA3) synthesis pathwayisopentenyl pyrophosphateNicotiana benthamiana

Identifiers

PMID35524450
PMCPMC9543464
OpenAlexW4229063255

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.