Evidence map›Paper›PMID 35523946›Full record

ArticleOncogene2022

3'untranslated regions of tumor suppressor genes evolved specific features to favor cancer resistance.

Dan Huang, Xiansong Wang, Ziheng Huang, Yingzhi Liu, Xiaodong Liu, Tony Gin, Sunny Hei Wong, Jun Yu, Lin Zhang, Matthew Tak Vai Chan and 2 more

Abstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Dan Huang *Department of Anaesthesia and Intensive Care and Peter Hung Pain Research Institute, The Chinese University of Hong Kong, Hong Kong, People's Republic of China.ORCID http://orcid.org/0000-0003-3022-5772
Xiansong Wang *Department of Anaesthesia and Intensive Care and Peter Hung Pain Research Institute, The Chinese University of Hong Kong, Hong Kong, People's Republic of China.
Ziheng HuangDepartment of Anaesthesia and Intensive Care and Peter Hung Pain Research Institute, The Chinese University of Hong Kong, Hong Kong, People's Republic of China.
Yingzhi LiuDepartment of Anaesthesia and Intensive Care and Peter Hung Pain Research Institute, The Chinese University of Hong Kong, Hong Kong, People's Republic of China.
Xiaodong LiuDepartment of Anaesthesia and Intensive Care and Peter Hung Pain Research Institute, The Chinese University of Hong Kong, Hong Kong, People's Republic of China.
Tony GinDepartment of Anaesthesia and Intensive Care and Peter Hung Pain Research Institute, The Chinese University of Hong Kong, Hong Kong, People's Republic of China.ORCID http://orcid.org/0000-0001-7283-6761
Sunny Hei WongCUHK Shenzhen Research Institute, Shenzhen, Guangdong, People's Republic of China.ORCID http://orcid.org/0000-0002-3354-9310
Jun YuCUHK Shenzhen Research Institute, Shenzhen, Guangdong, People's Republic of China.ORCID http://orcid.org/0000-0001-5008-2153
Lin ZhangDepartment of Anaesthesia and Intensive Care and Peter Hung Pain Research Institute, The Chinese University of Hong Kong, Hong Kong, People's Republic of China.
Matthew Tak Vai ChanDepartment of Anaesthesia and Intensive Care and Peter Hung Pain Research Institute, The Chinese University of Hong Kong, Hong Kong, People's Republic of China. mtvchan@cuhk.edu.hk.ORCID http://orcid.org/0000-0002-3574-7855
Huarong ChenDepartment of Anaesthesia and Intensive Care and Peter Hung Pain Research Institute, The Chinese University of Hong Kong, Hong Kong, People's Republic of China. hchen2@cuhk.edu.hk.ORCID http://orcid.org/0000-0003-2192-1864
William Ka Kei WuDepartment of Anaesthesia and Intensive Care and Peter Hung Pain Research Institute, The Chinese University of Hong Kong, Hong Kong, People's Republic of China. wukakei@cuhk.edu.hk.ORCID http://orcid.org/0000-0002-5662-5240

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cancer-related genes have evolved specific genetic and genomic features to favor tumor suppression. Previously we reported that tumor suppressor genes (TSGs) acquired high promoter CpG dinucleotide frequencies during evolution to maintain high expression in normal tissues and resist cancer-specific downregulation. In this study, we investigated whether 3'untranslated regions (3'UTRs) of TSGs have evolved specific features to carry out similar functions. We found that 3'UTRs of TSGs, especially those involved in multiple histological types and pediatric cancers, are longer than those of non-cancer genes. 3'UTRs of TSGs also exhibit higher density of binding sites for RNA-binding proteins (RBPs), particularly those having high affinities to C-rich motifs. Both longer 3'UTR length and RBP binding sites enrichment are correlated with higher gene expression in normal tissues across tissue types. Moreover, both features together with the correlated N

Indexed as

Genes, Tumor SuppressorNeoplasms3' Untranslated RegionsBinding SitesChildHumansPromoter Regions, Genetic3' Untranslated Regions

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.