Evidence map›Paper›PMID 35522749›Full record

ArticleScience advances2022

Nanobody assemblies with fully flexible topology enabled by genetically encoded tetrazine amino acids.

Elise M Van Fossen, Riley M Bednar, Subhashis Jana, Rachel Franklin, Joseph Beckman, P Andrew Karplus, Ryan A Mehl

Abstract read
In one paragraph

Article in Science advances, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. An Expanded Toolbox for Versatile Chemical Editing of Adeno-Associated Virus.Angewandte Chemie (International ed. in English) · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Elise M Van FossenDepartment of Biochemistry and Biophysics, Oregon State University, Corvallis, OR 97331, USA.ORCID 0000-0002-7978-6098
Riley M BednarDepartment of Biochemistry and Biophysics, Oregon State University, Corvallis, OR 97331, USA.ORCID 0000-0001-9452-825X
Subhashis JanaDepartment of Biochemistry and Biophysics, Oregon State University, Corvallis, OR 97331, USA.ORCID 0000-0003-2006-4100
Rachel FranklinDepartment of Biochemistry and Biophysics, Oregon State University, Corvallis, OR 97331, USA.ORCID 0000-0002-8940-6204
Joseph BeckmanDepartment of Biochemistry and Biophysics, Oregon State University, Corvallis, OR 97331, USA.ORCID 0000-0003-1855-4653
P Andrew KarplusDepartment of Biochemistry and Biophysics, Oregon State University, Corvallis, OR 97331, USA.
Ryan A MehlDepartment of Biochemistry and Biophysics, Oregon State University, Corvallis, OR 97331, USA.ORCID 0000-0003-2932-4941

Funding

Resource for Biocomputing Visualization and InformaticsP41GM103311 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2012 to 2017
$8.2M
The GCE4All Center: Unleashing the Potential of Genetic Code Expansion for Biomedical ResearchRM1GM144227 · NIGMS · OREGON STATE UNIVERSITY · PI RYAN A MEHL · 2022 to 2026
$6.2M
Development of an improved core technology for efficient genetic code expansion in biomedical researchR01GM131168 · NIGMS · OREGON STATE UNIVERSITY · PI MEHL, RYAN A · 2019 to 2021
$1.1M
NIGMS NIH HHS P41 GM103311NIGMS NIH HHS R01 GM131168NIGMS NIH HHS RM1 GM144227
6 · The paper itself

Abstract

Assembling nanobodies (Nbs) into polyvalent multimers is a powerful strategy for improving the effectiveness of Nb-based therapeutics and biotechnological tools. However, generally effective approaches to Nb assembly are currently restricted to the amino or carboxyl termini, greatly limiting the diversity of Nb multimer topologies that can be produced. Here, we show that reactive tetrazine groups-site-specifically inserted by genetic code expansion at Nb surface sites-are compatible with Nb folding and function, enabling Nb assembly at any desired point. Using two anti-SARS-CoV-2 Nbs with viral neutralization ability, we created Nb homo- and heterodimers with improved properties compared with conventionally linked Nb homodimers, which, in the case of our tetrazine-conjugated trimer, translated into enhanced viral neutralization. Thus, this tetrazine-based approach is a generally applicable strategy that greatly increases the accessible range of Nb assembly topologies, and thereby adds the optimization of topology as an effective avenue to generate Nb assemblies with improved efficacy.

Identifiers

PMID35522749
PMCPMC9075797

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.