Evidence map›Paper›PMID 35522533›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2022

Myeloma Genome Project Panel is a Comprehensive Targeted Genomics Panel for Molecular Profiling of Patients with Multiple Myeloma.

Parvathi Sudha, Aarif Ahsan, Cody Ashby, Tasneem Kausar, Akhil Khera, Mohammad H Kazeroun, Chih-Chao Hsu, Lin Wang, Evelyn Fitzsimons, Outi Salminen and 15 more

Open access · bronzeAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 20 citations in OpenAlex.

  1. International Myeloma Society/International Myeloma Working Group Consensus Recommendations on the Definition of High-Risk Multiple Myeloma.Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 9 institutions in 3 countries.

Parvathi Sudha *Melvin and Bren Simon Comprehensive Cancer Center, Division of Hematology Oncology, Indiana University School of Medicine, Indiana University, Indianapolis, Indiana.ORCID 0000-0002-6970-5215
Aarif Ahsan *Translational Medicine, Bristol Myers Squibb, Summit, New Jersey.
Cody AshbyDepartment of Biomedical Informatics, College of Medicine, University of Arkansas for Medical Sciences, Little Rock, Arkansas.ORCID 0000-0002-9361-0283
Tasneem KausarTranslational Medicine, Bristol Myers Squibb, Summit, New Jersey.
Akhil KheraOxford University Hospitals NHS Foundation Trust, Oxford, United Kingdom.
Mohammad H KazerounMRC Molecular Haematology Unit, MRC Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, United Kingdom.
Chih-Chao HsuTranslational Medicine, Bristol Myers Squibb, Summit, New Jersey.
Lin WangDepartment of Pathology and Laboratory Research, Indiana University School of Medicine, Indiana University, Indianapolis, Indiana.
Evelyn FitzsimonsCancer Institute, University College London, London, United Kingdom.
Outi SalminenMRC Molecular Haematology Unit, MRC Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, United Kingdom.
Patrick BlaneyPerlmutter Cancer Center, NYU Langone Medical Center, New York, New York.ORCID 0000-0002-9319-8866
Magdalena CzaderDepartment of Pathology and Laboratory Research, Indiana University School of Medicine, Indiana University, Indianapolis, Indiana.
Jonathan WilliamsOxford University Hospitals NHS Foundation Trust, Oxford, United Kingdom.ORCID 0000-0003-2672-2450
Mohammad I Abu ZaidMelvin and Bren Simon Comprehensive Cancer Center, Division of Hematology Oncology, Indiana University School of Medicine, Indiana University, Indianapolis, Indiana.ORCID 0000-0002-4018-6941
Naser Ansari-PourMRC Molecular Haematology Unit, MRC Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, United Kingdom.ORCID 0000-0003-0908-0484
Kwee L YongCancer Institute, University College London, London, United Kingdom.ORCID 0000-0002-6487-276X
Frits van RheeMyeloma Center, Winthrop P. Rockefeller Cancer institute, University of Arkansas for Medical Sciences, Little Rock, Arkansas.
William E PierceallTranslational Medicine, Bristol Myers Squibb, Summit, New Jersey.
Gareth J MorganPerlmutter Cancer Center, NYU Langone Medical Center, New York, New York.ORCID 0000-0002-4271-6360
Erin FlyntTranslational Medicine, Bristol Myers Squibb, Summit, New Jersey.
Sarah GoodingOxford University Hospitals NHS Foundation Trust, Oxford, United Kingdom.ORCID 0000-0002-1549-7043
Rafat AbonourMelvin and Bren Simon Comprehensive Cancer Center, Division of Hematology Oncology, Indiana University School of Medicine, Indiana University, Indianapolis, Indiana.
Karthik Ramasamy *Oxford University Hospitals NHS Foundation Trust, Oxford, United Kingdom.
Anjan Thakurta *Translational Medicine, Bristol Myers Squibb, Summit, New Jersey.ORCID 0000-0003-0415-1706
Brian A Walker *Melvin and Bren Simon Comprehensive Cancer Center, Division of Hematology Oncology, Indiana University School of Medicine, Indiana University, Indianapolis, Indiana.ORCID 0000-0002-8615-6254
Bristol-Myers Squibb (Germany) · DEUniversity of Oxford · GBIndiana University Health · USIndiana University – Purdue University Indianapolis · USNYU Langone Health · USOxford University Hospitals NHS Trust · GBUniversity College London · GBUniversity of Arkansas for Medical Sciences · USWinthrop Rockefeller Foundation · US

Funding

Unfolded Protein Response and Autophagy in T Helper Cell Effector FunctionP20GM121176 · NIGMS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI Samuel Joseph Endicott · 2017 to 2026
$24.9M
Mutographs differentiating the racial and temporal incidence of multiple myelomaR01CA249981 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI MORGAN, GARETH JOHN · 2021 to 2025
$5.6M
Medical Research Council MR/V037439/1NCI NIH HHS R01 CA249981NIGMS NIH HHS P20 GM121176
6 · The paper itself

Abstract

purposeWe designed a comprehensive multiple myeloma targeted sequencing panel to identify common genomic abnormalities in a single assay and validated it against known standards. EXPERIMENTAL

designThe panel comprised 228 genes/exons for mutations, 6 regions for translocations, and 56 regions for copy number abnormalities (CNA). Toward panel validation, targeted sequencing was conducted on 233 patient samples and further validated using clinical FISH (translocations), multiplex ligation probe analysis (MLPA; CNAs), whole-genome sequencing (WGS; CNAs, mutations, translocations), or droplet digital PCR (ddPCR) of known standards (mutations).

resultsCanonical immunoglobulin heavy chain translocations were detected in 43.2% of patients by sequencing, and aligned with FISH except for 1 patient. CNAs determined by sequencing and MLPA for 22 regions were comparable in 103 samples and concordance between platforms was R2 = 0.969. Variant allele frequency (VAF) for 74 mutations were compared between sequencing and ddPCR with concordance of R2 = 0.9849.

conclusionsIn summary, we have developed a targeted sequencing panel that is as robust or superior to FISH and WGS. This molecular panel is cost-effective, comprehensive, clinically actionable, and can be routinely deployed to assist risk stratification at diagnosis or posttreatment to guide sequencing of therapies.

Indexed as

Multiple MyelomaDNA Copy Number VariationsGenomicsHigh-Throughput Nucleotide SequencingHumansMutationTranslocation, GeneticWhole Genome Sequencing

Identifiers

PMID35522533
PMCPMC9250632
OpenAlexW4229061852

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.