Evidence map›Paper›PMID 35522211›Full record

ArticlePlant physiology2022

Single-parent expression complementation contributes to phenotypic heterosis in maize hybrids.

Jutta A Baldauf, Meiling Liu, Lucia Vedder, Peng Yu, Hans-Peter Piepho, Heiko Schoof, Dan Nettleton, Frank Hochholdinger

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Molecular dissection of heterosis in cereal roots and their rhizosphere.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Review
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Jutta A BaldaufInstitute of Crop Science and Resource Conservation, Crop Functional Genomics, University of Bonn, 53113 Bonn, Germany.ORCID 0000-0002-7286-0558
Meiling LiuDepartment of Statistics, Iowa State University, Ames, Iowa 50011-1210, USA.ORCID 0000-0001-7953-1506
Lucia VedderInstitute of Crop Science and Resource Conservation, Crop Bioinformatics, University of Bonn, 53115 Bonn, Germany.ORCID 0000-0002-8924-9800
Peng YuEmmy Noether Group Root Functional Biology, Institute of Crop Science and Resource Conservation, University of Bonn, 53113 Bonn, Germany.ORCID 0000-0003-1670-8428
Hans-Peter PiephoInstitute of Crop Science, Biostatistics Unit, University of Hohenheim, 70599 Stuttgart, Germany.ORCID 0000-0001-7813-2992
Heiko SchoofInstitute of Crop Science and Resource Conservation, Crop Bioinformatics, University of Bonn, 53115 Bonn, Germany.ORCID 0000-0002-1527-3752
Dan NettletonDepartment of Statistics, Iowa State University, Ames, Iowa 50011-1210, USA.ORCID 0000-0002-6045-1036
Frank HochholdingerInstitute of Crop Science and Resource Conservation, Crop Functional Genomics, University of Bonn, 53113 Bonn, Germany.ORCID 0000-0002-5155-0884
University of Bonn · DEIowa State University · USUniversity of Hohenheim · DE

Funding

Hierarchical Modeling and Parallelized Bayesian Inference for RNAseq AnalysisR01GM109458 · NIGMS · IOWA STATE UNIVERSITY · PI NETTLETON, DANIEL · 2013 to 2016
$1.1M
NIGMS NIH HHS R01 GM109458
6 · The paper itself

Abstract

The dominance model of heterosis explains the superior performance of F1-hybrids via the complementation of deleterious alleles by beneficial alleles in many genes. Genes active in one parent but inactive in the second lead to single-parent expression (SPE) complementation in maize (Zea mays L.) hybrids. In this study, SPE complementation resulted in approximately 700 additionally active genes in different tissues of genetically diverse maize hybrids on average. We established that the number of SPE genes is significantly associated with mid-parent heterosis (MPH) for all surveyed phenotypic traits. In addition, we highlighted that maternally (SPE_B) and paternally (SPE_X) active SPE genes enriched in gene co-expression modules are highly correlated within each SPE type but separated between these two SPE types. While SPE_B-enriched co-expression modules are positively correlated with phenotypic traits, SPE_X-enriched modules displayed a negative correlation. Gene ontology term enrichment analyses indicated that SPE_B patterns are associated with growth and development, whereas SPE_X patterns are enriched in defense and stress response. In summary, these results link the degree of phenotypic MPH to the prevalence of gene expression complementation observed by SPE, supporting the notion that hybrids benefit from SPE complementation via its role in coordinating maize development in fluctuating environments.

Indexed as

Hybrid VigorZea maysAllelesGene Expression Regulation, PlantHybridization, Genetic

Identifiers

PMID35522211
PMCPMC9237695
OpenAlexW4224228290

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.