PolyReco: A Method to Automatically Label Collinear Regions and Recognize Polyploidy Events Based on the

Fushun Wang, Kang Zhang, Ruolan Zhang, Hongquan Liu, Weijin Zhang, Zhanxiao Jia, Chunyang Wang

Abstract read

In one paragraph

Article in Frontiers in genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it

0cells of the map it votes in

3citing papers in PubMed

–field-weighted citation impact

1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

The Risk Genes S1PR5, CMC1, and ASAH1 as Potential Targets for the Diagnosis, Immunotherapy, and Treatment of Colon Adenocarcinoma by Single-Cell and Bulk RNA Sequencing Analysis.Current medicinal chemistry · 2026
Article
An intelligent recognition method of chromosome rearrangement patterns based on information entropy.Scientific reports · 2022
Article
Hijacking a rapid and scalable metagenomic method reveals subgenome dynamics and evolution in polyploid plants.Applications in plant sciences
Article

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Fushun WangDepartment of Information Science and Technology, Hebei Agricultural University, Baoding, China.

Kang ZhangDepartment of Life Science, Hebei Agricultural University, Baoding, China.

Ruolan ZhangDepartment of Information Science and Technology, Hebei Agricultural University, Baoding, China.

Hongquan LiuDepartment of Urban and Rural Construction, Hebei Agricultural University, Baoding, China.

Weijin ZhangDepartment of Information Science and Technology, Hebei Agricultural University, Baoding, China.

Zhanxiao JiaDepartment of Information Science and Technology, Hebei Agricultural University, Baoding, China.

Chunyang WangDepartment of Life Science, Hebei Agricultural University, Baoding, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polyploidization plays a critical role in producing new gene functions and promoting species evolution. Effective identification of polyploid types can be helpful in exploring the evolutionary mechanism. However, current methods for detecting polyploid types have some major limitations, such as being time-consuming and strong subjectivity, etc. In order to objectively and scientifically recognize collinearity fragments and polyploid types, we developed PolyReco method, which can automatically label collinear regions and recognize polyploidy events based on the

Indexed as

chromosomeclusteringcollinearity fragmentDBSCANpolyploidy

Identifiers

PMID35518356

DOI10.3389/fgene.2022.842387

PMCPMC9065682

What OpenQuestion holds

Textmetadata

LicenceCC BY

Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.