Evidence map›Paper›PMID 35517508›Full record

ArticleFrontiers in cell and developmental biology2022

A Stage-Specific OTX2 Regulatory Network and Maturation-Associated Gene Programs Are Inherent Barriers to RPE Neural Competency.

Jared A Tangeman, J Raúl Pérez-Estrada, Emily Van Zeeland, Lin Liu, Alexandra Danciutiu, Erika Grajales-Esquivel, Byran Smucker, Chun Liang, Katia Del Rio-Tsonis

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cell and developmental biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
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  5. Article
  6. Effects ofMolecules (Basel, Switzerland) · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Jared A TangemanDepartment of Biology and Center for Visual Sciences, Miami University, Oxford, OH, United States.
J Raúl Pérez-EstradaDepartment of Biology and Center for Visual Sciences, Miami University, Oxford, OH, United States.
Emily Van ZeelandDepartment of Biology and Center for Visual Sciences, Miami University, Oxford, OH, United States.
Lin LiuDepartment of Biology and Center for Visual Sciences, Miami University, Oxford, OH, United States.
Alexandra DanciutiuDepartment of Biology and Center for Visual Sciences, Miami University, Oxford, OH, United States.
Erika Grajales-EsquivelDepartment of Biology and Center for Visual Sciences, Miami University, Oxford, OH, United States.
Byran SmuckerDepartment of Statistics, Miami University, Oxford, OH, United States.
Chun LiangDepartment of Biology and Center for Visual Sciences, Miami University, Oxford, OH, United States.
Katia Del Rio-TsonisDepartment of Biology and Center for Visual Sciences, Miami University, Oxford, OH, United States.
Miami University · US

Funding

The role of Injury signals in RPE ReprogrammingR01EY026816 · NEI · MIAMI UNIVERSITY OXFORD · PI DEL RIO-TSONIS, KATIA · 2016 to 2020
$1.8M
NEI NIH HHS R01 EY026816
6 · The paper itself

Abstract

The retinal pigment epithelium (RPE) exhibits a diverse range of plasticity across vertebrates and is a potential source of cells for the regeneration of retinal neurons. Embryonic amniotes possess a transitory ability to regenerate neural retina through the reprogramming of RPE cells in an FGF-dependent manner. Chicken RPE can regenerate neural retina at embryonic day 4 (E4), but RPE neural competence is lost by embryonic day 5 (E5). To identify mechanisms that underlie loss of regenerative competence, we performed RNA and ATAC sequencing using E4 and E5 chicken RPE, as well as at both stages following retinectomy and FGF2 treatment. We find that genes associated with neural retina fate remain FGF2-inducible in the non-regenerative E5 RPE. Coinciding with fate restriction, RPE cells stably exit the cell cycle and dampen the expression of cell cycle progression genes normally expressed during regeneration, including

Indexed as

ATAC-seqOtx2regenerationreprogrammingretinaRPE

Identifiers

PMID35517508
PMCPMC9062105
OpenAlexW4224292902

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.