ArticleFrontiers in neuroscience2022
Microscopy-BIDS: An Extension to the Brain Imaging Data Structure for Microscopy Data.
Article in Frontiers in neuroscience, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
15 citing papers in PubMed.
- Siibra: a software tool suite for realizing a Multilevel Human Brain Atlas from complex data resources.Nature methods · 2026Article
- MRS-BIDS, an extension to the Brain Imaging Data Structure for magnetic resonance spectroscopy.Scientific data · 2025Article
- Sharing Neuroimaging Data with Squirrel - A Relational Data Format to Store Raw to Analyzed Data and Everything in Between.Neuroinformatics · 2025Article
- Affording reusable data: recommendations for researchers from a data-intensive project.Scientific data · 2025Article
- Automated algorithm for medical data structuring, and segmentation using artificial intelligence within secured environment for dataset creation.European journal of radiology open · 2024Article
- Motion-BIDS: an extension to the brain imaging data structure to organize motion data for reproducible research.Scientific data · 2024Article
- Deep learning-based localization algorithms on fluorescence human brain 3D reconstruction: a comparative study using stereology as a reference.Scientific reports · 2024Article
- The past, present, and future of the brain imaging data structure (BIDS).Imaging neuroscience (Cambridge, Mass.) · 2024Review
- ezBIDS: Guided standardization of neuroimaging data interoperable with major data archives and platforms.Scientific data · 2024Article
- Article
- Big data in contemporary electron microscopy: challenges and opportunities in data transfer, compute and management.Histochemistry and cell biology · 2023Review
- OME-Zarr: a cloud-optimized bioimaging file format with international community support.Histochemistry and cell biology · 2023Article
- OME-Zarr: a cloud-optimized bioimaging file format with international community support.bioRxiv : the preprint server for biology · 2023Article
- Data management strategy for a collaborative research center.GigaScience · 2022Article
- Review
Corrections and comments
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Authors and funding
17 authors.
Funding
Abstract
The Brain Imaging Data Structure (BIDS) is a specification for organizing, sharing, and archiving neuroimaging data and metadata in a reusable way. First developed for magnetic resonance imaging (MRI) datasets, the community-led specification evolved rapidly to include other modalities such as magnetoencephalography, positron emission tomography, and quantitative MRI (qMRI). In this work, we present an extension to BIDS for microscopy imaging data, along with example datasets. Microscopy-BIDS supports common imaging methods, including 2D/3D,
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.